RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 C11orf54Q9H0W9 315 aaPredicted RBP3.84□□□□□ -1.8
CNGA1-201ENST00000358519 MFSD1Q9H3U5 465 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 RANBP3Q9H6Z4 567 aaPredicted RBP3.84□□□□□ -1.8
CNGA1-201ENST00000358519 AKTIPQ9H8T0 292 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 EML4Q9HC35 981 aaKnown RBP3.84□□□□□ -1.8
CNGA1-201ENST00000358519 CCNB1IP1Q9NPC3 277 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 DYRK4Q9NR20 520 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 ABCB8Q9NUT2 735 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 SPATA6Q9NWH7 488 aaPredicted RBP3.84□□□□□ -1.8
CNGA1-201ENST00000358519 GPATCH2LQ9NWQ4 482 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 HPF1Q9NWY4 346 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 RDH8Q9NYR8 311 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 SLAMF8Q9P0V8 285 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 DNAJB9Q9UBS3 223 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 REV1Q9UBZ9 1251 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.84□□□□□ -1.8
CNGA1-201ENST00000358519 PCOLCE2Q9UKZ9 415 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 MAPRE3Q9UPY8 281 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 PPIL1Q9Y3C6 166 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 GMPPBQ9Y5P6 360 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 ALG5Q9Y673 324 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 V9GYH0 126 aa3.84□□□□□ -1.8
CNGA1-201ENST00000358519 ANAPC1Q9H1A4 1944 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 TPRP12270 2363 aaKnown RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ZCWPW2A0A1B0GU75 182 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 RPS10-NUDT3A0A1W2PQS6 291 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 PIPSLA2A3N6 862 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 LCHNA4D1U4 455 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 WASHC1A8K0Z3 465 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 LOC730098B7Z3J9 87 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 H3BNC9 293 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 BTN3A1O00481 513 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 STX16O14662 325 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 SLC7A4O43246 635 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 MITFO75030 526 aaPredicted RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 NDUFS6O75380 124 aaKnown RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 TRIM3O75382 744 aaPredicted RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 SUPT7LO94864 414 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 WDPCPO95876 746 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 RAF1P04049 648 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 CYP4B1P13584 511 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 POU1F1P28069 291 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ADORA2BP29275 332 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 CASP2P42575 452 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 KCNC1P48547 511 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 SLC11A1P49279 550 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 CLCN7P51798 805 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ARHGDIBP52566 201 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 AP1S2P56377 157 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 EEFSECP57772 596 aaKnown RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 KCNK10P57789 538 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 MRPL28Q13084 256 aaKnown RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 MAB21L1Q13394 359 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 OLIG2Q13516 323 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 FGFBP1Q14512 234 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ZNF460Q14592 562 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ZNF169Q14929 603 aaPredicted RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 QPRTQ15274 297 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ANGPT1Q15389 498 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 CDO1Q16878 200 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 KLHL12Q53G59 568 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ZC3H12BQ5HYM0 836 aaKnown RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 TOR1AIP1Q5JTV8 583 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 PAGE3Q5JUK9 113 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 CLLU1Q5K131 121 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 OTUD1Q5VV17 481 aaPredicted RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 GPR139Q6DWJ6 353 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 SCYL2Q6P3W7 929 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ZC3H14Q6PJT7 736 aaKnown RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 PLET1Q6UQ28 207 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 CERS6Q6ZMG9 384 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ARHGAP36Q6ZRI8 547 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 TRILQ7L0X0 811 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 SLC46A3Q7Z3Q1 461 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 KIAA0907Q7Z7F0 614 aaPredicted RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 GALNT5Q7Z7M9 940 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 TMEM135Q86UB9 458 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 UBALD2Q8IYN6 164 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 MIER2Q8N344 545 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 SVOPLQ8N434 492 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ATPAF2Q8N5M1 289 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 FAM86B1Q8N7N1 296 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 KCT2Q8NC54 265 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 C3orf58Q8NDZ4 430 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 OR7G3Q8NG95 312 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 OR6M1Q8NGM8 313 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 CLHC1Q8NHS4 586 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 UBA3Q8TBC4 463 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 GPR151Q8TDV0 419 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 SMG7Q92540 1137 aaKnown RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 YIPF5Q969M3 257 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 FBXO32Q969P5 355 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 PHF21AQ96BD5 680 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ULK4Q96C45 1275 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 C19orf60Q96EN9 201 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 ZSWIM3Q96MP5 696 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 MRPL57Q9BQC6 102 aaKnown RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 TRMOQ9BU70 441 aa3.83□□□□□ -1.8
CNGA1-201ENST00000358519 CPEB1Q9BZB8 566 aaKnown RBP3.83□□□□□ -1.8
CNGA1-201ENST00000358519 RACGAP1Q9H0H5 632 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms