RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 IRAK2O43187 625 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 RAD51DO75771 328 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 ERCC1P07992 297 aaPredicted RBP12.42□□□□□ -0.42
SMC4-202ENST00000357388 GNRHRP30968 328 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 ELOAQ14241 798 aaKnown RBP12.42□□□□□ -0.42
SMC4-202ENST00000357388 PRAMEF13Q5VWM6 474 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 TMEM205Q6UW68 189 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 TBC1D15Q8TC07 691 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 NTAN1Q96AB6 310 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 HMCESQ96FZ2 354 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 URM1Q9BTM9 101 aaKnown RBP12.42□□□□□ -0.42
SMC4-202ENST00000357388 ABCG5Q9H222 651 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 SLC2A4RGQ9NR83 387 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 NME7Q9Y5B8 376 aa12.42□□□□□ -0.42
SMC4-202ENST00000357388 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 HTR1EP28566 365 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 WDR45BQ5MNZ6 344 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 TRMT10BQ6PF06 316 aaKnown RBP12.41□□□□□ -0.42
SMC4-202ENST00000357388 WDSUB1Q8N9V3 476 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 BBS10Q8TAM1 723 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 THEM6Q8WUY1 208 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 OR4K3Q96R72 315 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 B3GNT5Q9BYG0 378 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 C11orf49Q9H6J7 331 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 MAGIXQ9H6Y5 334 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 GOLGA2P5Q9HBQ8 144 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 PCDHB3Q9Y5E6 796 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ARL5AQ9Y689 179 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 MANBAO00462 879 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 EBLN1P0CF75 366 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 IRF5Q13568 498 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 CLCA4Q14CN2 919 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ZNF550Q7Z398 422 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 NPAS3Q8IXF0 933 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 OR7D4Q8NG98 312 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 OR5T2Q8NGG2 359 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 PDZD7Q9H5P4 517 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 POPDC3Q9HBV1 291 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 FCF1Q9Y324 198 aaKnown RBP12.41□□□□□ -0.42
SMC4-202ENST00000357388 PCYT1BQ9Y5K3 369 aaPredicted RBP12.41□□□□□ -0.42
SMC4-202ENST00000357388 WNT9AO14904 365 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 TSPAN15O95858 294 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ACTA2P62736 377 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ACTG2P63267 376 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 HACD2Q6Y1H2 254 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 TMEM156Q8N614 296 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 OR51D1Q8NGF3 324 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 AUTS2Q8WXX7 1259 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 CNOT9Q92600 299 aaKnown RBP12.41□□□□□ -0.42
SMC4-202ENST00000357388 HBEGFQ99075 208 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ORAI3Q9BRQ5 295 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 TRMT61BQ9BVS5 477 aaKnown RBP12.41□□□□□ -0.42
SMC4-202ENST00000357388 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.41□□□□□ -0.427e-12■■■■■ 38.5
SMC4-202ENST00000357388 INSL6Q9Y581 213 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 RFPL3O75679 317 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 SC5DO75845 299 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 TMEM63AO94886 807 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 OXSR1O95747 527 aaPredicted RBP12.41□□□□□ -0.42
SMC4-202ENST00000357388 CLCNKBP51801 687 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ACTBP60709 375 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ACTG1P63261 375 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 AAK1Q2M2I8 961 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 MBLAC2Q68D91 279 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 C4orf32Q8N8J7 132 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 GRHL3Q8TE85 626 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 PTPN18Q99952 460 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 MRM3Q9HC36 420 aaKnown RBP12.41□□□□□ -0.42
SMC4-202ENST00000357388 CLDND1Q9NY35 253 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 DNAJC27Q9NZQ0 273 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 GRHPRQ9UBQ7 328 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ZDHHC2Q9UIJ5 367 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 CASP7P55210 303 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 UGCGQ16739 394 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 HSDL2Q6YN16 418 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 TCEANCQ8N8B7 351 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 OR8S1Q8NH09 359 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 HMGB4Q8WW32 186 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 MUS81Q96NY9 551 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 DGAT2Q96PD7 388 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 BEX2Q9BXY8 128 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 BEX1Q9HBH7 125 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 OR2S2Q9NQN1 319 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ARMC1Q9NVT9 282 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ZDHHC3Q9NYG2 299 aa12.41□□□□□ -0.42
SMC4-202ENST00000357388 ZNF705FA8MVS1 300 aaPredicted RBP12.4□□□□□ -0.42
SMC4-202ENST00000357388 ZNF705DP0CH99 300 aaPredicted RBP12.4□□□□□ -0.42
SMC4-202ENST00000357388 ZNF705BP0CI00 300 aaPredicted RBP12.4□□□□□ -0.42
SMC4-202ENST00000357388 CHRNB1P11230 501 aa12.4□□□□□ -0.42
SMC4-202ENST00000357388 MAOAP21397 527 aa12.4□□□□□ -0.42
SMC4-202ENST00000357388 S1PR1P21453 382 aa12.4□□□□□ -0.42
SMC4-202ENST00000357388 ZNF616Q08AN1 781 aa12.4□□□□□ -0.42
SMC4-202ENST00000357388 SLBPQ14493 270 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMC4-202ENST00000357388 KCTD18Q6PI47 426 aaPredicted RBP12.4□□□□□ -0.42
SMC4-202ENST00000357388 ENPP7Q6UWV6 458 aa12.4□□□□□ -0.42
SMC4-202ENST00000357388 PXKQ7Z7A4 578 aa12.4□□□□□ -0.42
SMC4-202ENST00000357388 CCDC71Q8IV32 467 aaPredicted RBP12.4□□□□□ -0.42
SMC4-202ENST00000357388 HS3ST5Q8IZT8 346 aa12.4□□□□□ -0.42
SMC4-202ENST00000357388 GALNT11Q8NCW6 608 aa12.4□□□□□ -0.42
SMC4-202ENST00000357388 OR4K17Q8NGC6 315 aa12.4□□□□□ -0.42
SMC4-202ENST00000357388 TMEM125Q96AQ2 219 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms