RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 INO80EQ8NBZ0 244 aaPredicted RBP11.32□□□□□ -0.6
COL9A1-202ENST00000357250 KLK6Q92876 244 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 TXLNGYQ9BZA5 131 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF208O43345 1280 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 SLITRK5O94991 958 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 ITGA3P26006 1051 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 HLCSP50747 726 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 SYCE2Q6PIF2 218 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 GPRIN1Q7Z2K8 1008 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 RNF130Q86XS8 419 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 SLC15A3Q8IY34 581 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 PIP5K1AQ99755 562 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 YIPF4Q9BSR8 244 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 MKL2Q9ULH7 1088 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 CMAHPQ9Y471 501 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 WNT6Q9Y6F9 365 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 KANTRA0A1W2PQU2 76 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 WASHC1A8K0Z3 465 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 WASH3PC4AMC7 463 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 NPC1O15118 1278 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 BCKDHAP12694 445 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 PGGT1BP53609 377 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 CLCA4Q14CN2 919 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 PM20D1Q6GTS8 502 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 WASH2PQ6VEQ5 465 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 NXPE2Q96DL1 559 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 S100A16Q96FQ6 103 aaKnown RBP11.32□□□□□ -0.6
COL9A1-202ENST00000357250 HS6ST2Q96MM7 605 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 MCHR1Q99705 422 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 EIF3KQ9UBQ5 218 aaKnown RBP11.32□□□□□ -0.6
COL9A1-202ENST00000357250 AP1M2Q9Y6Q5 423 aa11.32□□□□□ -0.6
COL9A1-202ENST00000357250 DNAJC25-GNG10A0A024R161 153 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 MRPS14O60783 128 aaKnown RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 CDRT1O95170 752 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 HOXB2P14652 356 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 HNF1BP35680 557 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 ARF5P84085 180 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 TEAD2Q15562 447 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 ITPRIPL2Q3MIP1 535 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 SLC27A4Q6P1M0 643 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 YIPF7Q8N8F6 280 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 CCDC54Q8NEL0 328 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 FRMD6Q96NE9 622 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 G6PC3Q9BUM1 346 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 SPHK2Q9NRA0 654 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 A0A0D9SEW6 157 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 SOBPA7XYQ1 873 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 NPIPA5E9PKD4 350 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 HTR1AP08908 422 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF865P0CJ78 1059 aaPredicted RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 ARRB1P49407 418 aaPredicted RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 OR12D2P58182 307 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 LASP1Q14847 261 aaKnown RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 ABCA11PQ4W5N1 156 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 MANEALQ5VSG8 457 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 PRAMEF17Q5VTA0 474 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 PAQR7Q86WK9 346 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 GRHL3Q8TE85 626 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 BIRC8Q96P09 236 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 BRD7Q9NPI1 651 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 FANCFQ9NPI8 374 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 PNO1Q9NRX1 252 aaKnown RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 NPIPA1Q9UND3 350 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 MYO18AQ92614 2054 aaKnown RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 MAGEA6P43360 314 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 KCNC1P48547 511 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 NUDT6P53370 316 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 POU6F2P78424 691 aaPredicted RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 GAS6Q14393 721 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 C4orf46Q504U0 113 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 TMEM164Q5U3C3 297 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 CMTR2Q8IYT2 770 aaKnown RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 SCML4Q8N228 414 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 ARMC10Q8N2F6 343 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 TMEM174Q8WUU8 243 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 FBXL20Q96IG2 436 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 TBX5Q99593 518 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 MALT1Q9UDY8 824 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 C1orf226A1L170 272 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF840PA6NDX5 716 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 GPR32O75388 356 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 DBIP07108 87 aaKnown RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 FHP07954 510 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 IFI30P13284 250 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 RHCEP18577 417 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 DCKP27707 260 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 HSD11B1P28845 292 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 AKR1D1P51857 326 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 RPS21P63220 83 aaKnown RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 OGFRL1Q5TC84 451 aaPredicted RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF782Q6ZMW2 699 aaPredicted RBP11.31□□□□□ -0.6
COL9A1-202ENST00000357250 GALNTL5Q7Z4T8 443 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF366Q8N895 744 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 SUN5Q8TC36 379 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 PMEPA1Q969W9 287 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 RBP7Q96R05 134 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 MTMR10Q9NXD2 777 aa11.31□□□□□ -0.6
COL9A1-202ENST00000357250 MAGED1Q9Y5V3 778 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms