RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 GLAP06280 429 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 S100A3P33764 101 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 RAB14P61106 215 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 CREMQ03060 361 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 PRKCDQ05655 676 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SCN1BQ07699 218 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SIGLEC14Q08ET2 396 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ELAVL2Q12926 359 aaKnown RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 TSTQ16762 297 aaKnown RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 LHX8Q68G74 356 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 OR4F3Q6IEY1 312 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 ANKRD54Q6NXT1 300 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SNX20Q7Z614 316 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 NPAS4Q8IUM7 802 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 NLGN4YQ8NFZ3 816 aaPredicted RBP9.01□□□□□ -0.97
SMG6-202ENST00000354901 ACPTQ9BZG2 426 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 RNF121Q9H920 327 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SMURF1Q9HCE7 757 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 TM9SF3Q9HD45 589 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 NPAP1Q9NZP6 1156 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 EMC3Q9P0I2 261 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 SPATA2Q9UM82 520 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 CCL27Q9Y4X3 112 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 YIPF1Q9Y548 306 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 DOCK6Q96HP0 2047 aa9.01□□□□□ -0.97
SMG6-202ENST00000354901 A0A0B4J293 547 aa9□□□□□ -0.97
SMG6-202ENST00000354901 FAM240BA0A1B0GVZ2 78 aa9□□□□□ -0.97
SMG6-202ENST00000354901 LZTS3O60299 673 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 TRBC1P01850 177 aa9□□□□□ -0.97
SMG6-202ENST00000354901 CKMP06732 381 aa9□□□□□ -0.97
SMG6-202ENST00000354901 TALDO1P37837 337 aa9□□□□□ -0.97
SMG6-202ENST00000354901 CASP9P55211 416 aa9□□□□□ -0.97
SMG6-202ENST00000354901 RUNX1T1Q06455 604 aa9□□□□□ -0.97
SMG6-202ENST00000354901 SLC14A1Q13336 389 aa9□□□□□ -0.97
SMG6-202ENST00000354901 GPNMBQ14956 572 aa9□□□□□ -0.97
SMG6-202ENST00000354901 KIAA0040Q15053 153 aa9□□□□□ -0.97
SMG6-202ENST00000354901 DOK6Q6PKX4 331 aa9□□□□□ -0.97
SMG6-202ENST00000354901 CERS6Q6ZMG9 384 aa9□□□□□ -0.97
SMG6-202ENST00000354901 CHST9Q7L1S5 443 aa9□□□□□ -0.97
SMG6-202ENST00000354901 DNAJB7Q7Z6W7 309 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 ZSWIM9Q86XI8 627 aa9□□□□□ -0.97
SMG6-202ENST00000354901 GPR26Q8NDV2 337 aa9□□□□□ -0.97
SMG6-202ENST00000354901 OR8J3Q8NGG0 315 aa9□□□□□ -0.97
SMG6-202ENST00000354901 RNF31Q96EP0 1072 aa9□□□□□ -0.97
SMG6-202ENST00000354901 DIRAS2Q96HU8 199 aa9□□□□□ -0.97
SMG6-202ENST00000354901 KLF16Q9BXK1 252 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 SMG9Q9H0W8 520 aaKnown RBP9□□□□□ -0.97
SMG6-202ENST00000354901 C1orf109Q9NX04 203 aa9□□□□□ -0.97
SMG6-202ENST00000354901 GPR83Q9NYM4 423 aa9□□□□□ -0.97
SMG6-202ENST00000354901 PDP1Q9P0J1 537 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 ZNF639Q9UID6 485 aa9□□□□□ -0.97
SMG6-202ENST00000354901 OARD1Q9Y530 152 aa9□□□□□ -0.97
SMG6-202ENST00000354901 OR2A25A4D2G3 310 aa9□□□□□ -0.97
SMG6-202ENST00000354901 NPIPB15A6NHN6 443 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 POM121CA8CG34 1229 aa9□□□□□ -0.97
SMG6-202ENST00000354901 H7C0S8 307 aa9□□□□□ -0.97
SMG6-202ENST00000354901 IFRD1O00458 451 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 FZD6O60353 706 aa9□□□□□ -0.97
SMG6-202ENST00000354901 WBP4O75554 376 aaKnown RBP9□□□□□ -0.97
SMG6-202ENST00000354901 CPSF4O95639 269 aaKnown RBP9□□□□□ -0.97
SMG6-202ENST00000354901 NPPAP01160 153 aa9□□□□□ -0.97
SMG6-202ENST00000354901 ACRV1P26436 265 aa9□□□□□ -0.97
SMG6-202ENST00000354901 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 UGT2B15P54855 530 aa9□□□□□ -0.97
SMG6-202ENST00000354901 RPS14P62263 151 aaKnown RBP9□□□□□ -0.97
SMG6-202ENST00000354901 TSTA3Q13630 321 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 DSG2Q14126 1118 aa9□□□□□ -0.97
SMG6-202ENST00000354901 UGT8Q16880 541 aa9□□□□□ -0.97
SMG6-202ENST00000354901 SPATS1Q496A3 300 aa9□□□□□ -0.97
SMG6-202ENST00000354901 PRSS48Q7RTY5 328 aa9□□□□□ -0.97
SMG6-202ENST00000354901 ADHFE1Q8IWW8 467 aa9□□□□□ -0.97
SMG6-202ENST00000354901 SLC37A3Q8NCC5 494 aa9□□□□□ -0.97
SMG6-202ENST00000354901 ZNF431Q8TF32 576 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 DNASE1L2Q92874 299 aa9□□□□□ -0.97
SMG6-202ENST00000354901 KCNC2Q96PR1 638 aa9□□□□□ -0.97
SMG6-202ENST00000354901 VN1R3Q9BXE9 311 aa9□□□□□ -0.97
SMG6-202ENST00000354901 VNN3Q9NY84 501 aa9□□□□□ -0.97
SMG6-202ENST00000354901 SLC9A8Q9Y2E8 581 aa9□□□□□ -0.97
SMG6-202ENST00000354901 TRAV20A0A0B4J274 112 aa9□□□□□ -0.97
SMG6-202ENST00000354901 B4DXG7 233 aa9□□□□□ -0.97
SMG6-202ENST00000354901 PER2O15055 1255 aa9□□□□□ -0.97
SMG6-202ENST00000354901 CLDN9O95484 217 aa9□□□□□ -0.97
SMG6-202ENST00000354901 ANXA5P08758 320 aa9□□□□□ -0.97
SMG6-202ENST00000354901 AQP1P29972 269 aa9□□□□□ -0.97
SMG6-202ENST00000354901 ZNF81P51508 661 aa9□□□□□ -0.97
SMG6-202ENST00000354901 TEKQ02763 1124 aa9□□□□□ -0.97
SMG6-202ENST00000354901 VEPH1Q14D04 833 aa9□□□□□ -0.97
SMG6-202ENST00000354901 SNAPC1Q16533 368 aa9□□□□□ -0.97
SMG6-202ENST00000354901 ATP13A5Q4VNC0 1218 aa9□□□□□ -0.97
SMG6-202ENST00000354901 BHLHB9Q6PI77 547 aa9□□□□□ -0.97
SMG6-202ENST00000354901 UBE2R2Q712K3 238 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 METTL3Q86U44 580 aaKnown RBP9□□□□□ -0.97
SMG6-202ENST00000354901 KIF18BQ86Y91 864 aa9□□□□□ -0.97
SMG6-202ENST00000354901 PLCZ1Q86YW0 608 aa9□□□□□ -0.97
SMG6-202ENST00000354901 LINC00518Q8N0U6 118 aa9□□□□□ -0.97
SMG6-202ENST00000354901 PJA1Q8NG27 643 aa9□□□□□ -0.97
SMG6-202ENST00000354901 APIPQ96GX9 242 aa9□□□□□ -0.97
SMG6-202ENST00000354901 DPH2Q9BQC3 489 aaPredicted RBP9□□□□□ -0.97
SMG6-202ENST00000354901 EIF3KQ9UBQ5 218 aaKnown RBP9□□□□□ -0.97
SMG6-202ENST00000354901 MGAT4AQ9UM21 535 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms