RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 SNAP47Q5SQN1 464 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 WDR53Q7Z5U6 358 aaPredicted RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 ZNF605Q86T29 641 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 OR56A3Q8NH54 315 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 ZNF675Q8TD23 568 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 EFHD2Q96C19 240 aaPredicted RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 BRD9Q9H8M2 597 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 THSD1Q9NS62 852 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 SPASTQ9UBP0 616 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 CLEC2DQ9UHP7 191 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 ATP6V1HQ9UI12 483 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 DUSP12Q9UNI6 340 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 CHD7Q9P2D1 2997 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 HELZP42694 1942 aaKnown RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 ARHGEF33A8MVX0 844 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 PCDH17O14917 1159 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 IDH3BO43837 385 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 KIAA0513O60268 411 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 PPIBP23284 216 aaKnown RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 CHMP24386 653 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 SOAT1P35610 550 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 PREPP48147 710 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 DCDC1P59894 354 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 MICAQ29983 383 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 GAREM2Q75VX8 874 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 DENND6BQ8NEG7 585 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 PKP4Q99569 1192 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 ACAT2Q9BWD1 397 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 C1GALT1Q9NS00 363 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 DNAJC27Q9NZQ0 273 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 CCDC59Q9P031 241 aaKnown RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 C5AR2Q9P296 337 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 PRKAB1Q9Y478 270 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 MN1Q10571 1320 aaPredicted RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 EYSQ5T1H1 3165 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 SLC35F4A4IF30 521 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 TNFRSF11BO00300 401 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 AOC2O75106 756 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 NME6O75414 186 aaPredicted RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 AP2A2O94973 939 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 RECKO95980 971 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 HLA-FP30511 346 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 HNF4AP41235 474 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 CD83Q01151 205 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 IRF8Q02556 426 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 PRKCDQ05655 676 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 EIF4HQ15056 248 aaKnown RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 TEAD4Q15561 434 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 ZNF385BQ569K4 471 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 XKR6Q5GH73 641 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 CPTPQ5TA50 214 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 DEPDC1Q5TB30 811 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 ANXA8L1Q5VT79 327 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 USP43Q70EL4 1123 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 WDR36Q8NI36 951 aaKnown RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 MYDGFQ969H8 173 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 CIDECQ96AQ7 238 aaPredicted RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 CXorf40BQ96DE9 158 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 TRNT1Q96Q11 434 aaKnown RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 FYTTD1Q96QD9 318 aaKnown RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 CITED4Q96RK1 184 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 SORBS1Q9BX66 1292 aaKnown RBP9.2□□□□□ -0.94
RPE-201ENST00000354506 B4GALT6Q9UBX8 382 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 ITGB1BP2Q9UKP3 347 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 RAB23Q9ULC3 237 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 KLK4Q9Y5K2 254 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 INSL5Q9Y5Q6 135 aa9.2□□□□□ -0.94
RPE-201ENST00000354506 WASH3PC4AMC7 463 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 SMLR1H3BR10 107 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 IFI30P13284 250 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 ASMTP46597 345 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 OR2B6P58173 313 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 SNRPD2P62316 118 aaKnown RBP9.19□□□□□ -0.94
RPE-201ENST00000354506 SLAMF1Q13291 335 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 VEPH1Q14D04 833 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 MPEG1Q2M385 716 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 EXOC3L2Q2M3D2 409 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 FBXO43Q4G163 708 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 ASTLQ6HA08 431 aaPredicted RBP9.19□□□□□ -0.94
RPE-201ENST00000354506 C22orf39Q6P5X5 142 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 DPY19L3Q6ZPD9 716 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 NPAS3Q8IXF0 933 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 GPR65Q8IYL9 337 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 C1orf52Q8N6N3 182 aaKnown RBP9.19□□□□□ -0.94
RPE-201ENST00000354506 ZFP41Q8N8Y5 198 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 ZNF486Q96H40 463 aaPredicted RBP9.19□□□□□ -0.94
RPE-201ENST00000354506 TXNDC15Q96J42 360 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 BHLHE41Q9C0J9 482 aaPredicted RBP9.19□□□□□ -0.94
RPE-201ENST00000354506 TMEM38AQ9H6F2 299 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 STOX2Q9P2F5 926 aaPredicted RBP9.19□□□□□ -0.94
RPE-201ENST00000354506 ZNF282Q9UDV7 671 aaPredicted RBP9.19□□□□□ -0.94
RPE-201ENST00000354506 MUTYHQ9UIF7 546 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 MAPRE3Q9UPY8 281 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 PCM1Q15154 2024 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 SAGE2PA6NJ88 616 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 ADAMDEC1O15204 470 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 KMOO15229 486 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 SNX4O95219 450 aa9.19□□□□□ -0.94
RPE-201ENST00000354506 POP4O95707 220 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms