RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 PTOV1Q86YD1 416 aa16.37■□□□□ 0.21
SMARCC2-202ENST00000347471 TSTD1Q8NFU3 115 aa16.37■□□□□ 0.21
SMARCC2-202ENST00000347471 TFAP2CQ92754 450 aa16.37■□□□□ 0.21
SMARCC2-202ENST00000347471 CTPS2Q9NRF8 586 aa16.37■□□□□ 0.21
SMARCC2-202ENST00000347471 PNPLA3Q9NST1 481 aa16.37■□□□□ 0.21
SMARCC2-202ENST00000347471 ADPRHL2Q9NX46 363 aa16.37■□□□□ 0.21
SMARCC2-202ENST00000347471 TAAR2Q9P1P5 351 aa16.37■□□□□ 0.21
SMARCC2-202ENST00000347471 DOLKQ9UPQ8 538 aa16.37■□□□□ 0.21
SMARCC2-202ENST00000347471 SLCO1B1Q9Y6L6 691 aa16.37■□□□□ 0.21
SMARCC2-202ENST00000347471 IL7RP16871 459 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 CMPK1P30085 196 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 BTN3A2P78410 334 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 SLAMF1Q13291 335 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 SCARB2Q14108 478 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 HOMEZQ8IX15 550 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 KLHDC8AQ8IYD2 350 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 CCDC116Q8IYX3 515 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 ADGRF3Q8IZF5 1079 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 ZFP90Q8TF47 636 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 DUS3LQ96G46 650 aaKnown RBP16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 C8orf33Q9H7E9 229 aaPredicted RBP16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 LMAN1LQ9HAT1 526 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 POLMQ9NP87 494 aaPredicted RBP16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 PLXNA2O75051 1894 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 IGKV1-8A0A0C4DH67 115 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 FABP3P05413 133 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 BCHEP06276 602 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 SPATS1Q496A3 300 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 RNF165Q6ZSG1 346 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 LSRQ86X29 649 aaPredicted RBP16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 OR4N5Q8IXE1 308 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 ZNF555Q8NEP9 628 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 OR2L3Q8NG85 312 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 VANGL1Q8TAA9 524 aaPredicted RBP16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 CCDC115Q96NT0 180 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 FOXQ1Q9C009 403 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 EHD1Q9H4M9 534 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 CXorf36Q9H7Y0 433 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 NUP210Q8TEM1 1887 aaPredicted RBP16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 COL4A3Q01955 1670 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 WDR87Q6ZQQ6 2873 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 HSD17B2P37059 387 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 MRPS21P82921 87 aaKnown RBP16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 ARHGAP19Q14CB8 494 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 CYBRD1Q53TN4 286 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 INTS11Q5TA45 600 aaKnown RBP16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 NDUFAF5Q5TEU4 345 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 FAM71E1Q6IPT2 247 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 WDR53Q7Z5U6 358 aaPredicted RBP16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 VNN3Q9NY84 501 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 KLHL3Q9UH77 587 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 RPS6KA6Q9UK32 745 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 ABCA7Q8IZY2 2146 aa16.36■□□□□ 0.21
SMARCC2-202ENST00000347471 CAPGP40121 348 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 IL5RAQ01344 420 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 ALG11Q2TAA5 492 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 TRIM40Q6P9F5 258 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 TEFMQ96QE5 360 aaKnown RBP16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 REEP1Q9H902 201 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 SLC6A20Q9NP91 592 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 ZNF624Q9P2J8 865 aaPredicted RBP16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 DNMT3AQ9Y6K1 912 aaPredicted RBP16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 ANHXE9PGG2 379 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 GPR37L1O60883 481 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 H6PDO95479 791 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 NCBP2P52298 156 aaKnown RBP eCLIP16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 PIGFQ07326 219 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 SFSWAPQ12872 951 aaKnown RBP16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 DEFB110Q30KQ9 67 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 DEFB134Q4QY38 66 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 C11orf74Q86VG3 221 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 TBC1D19Q8N5T2 526 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 OR5D16Q8NGK9 328 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 DNAJB8Q8NHS0 232 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 TMIGD2Q96BF3 282 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 TM4SF18Q96CE8 201 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 SLAMF7Q9NQ25 335 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 STARD5Q9NSY2 213 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 CLCA2Q9UQC9 943 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 A0A1W2PS29 197 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 THEGLP0DJG4 465 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 RFX3P48380 749 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 CDK9P50750 372 aaKnown RBP16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 CDK6Q00534 326 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 BHLHE41Q9C0J9 482 aaPredicted RBP16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 ZCCHC3Q9NUD5 404 aaKnown RBP16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 SPATA7Q9P0W8 599 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 MMP17Q9ULZ9 603 aa16.35■□□□□ 0.21
SMARCC2-202ENST00000347471 GPX2P18283 190 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 PKLRP30613 574 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 DCTP40126 519 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 SLC9A5Q14940 896 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 C18orf63Q68DL7 685 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 OR4C11Q6IEV9 310 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 CEP68Q76N32 757 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 MYNNQ9NPC7 610 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 AP3M1Q9Y2T2 418 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 SEC16AO15027 2179 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 ZDBF2Q9HCK1 2354 aa16.34■□□□□ 0.21
SMARCC2-202ENST00000347471 HEATR5BQ9P2D3 2071 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms