RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 GBP5Q96PP8 586 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 TEFMQ96QE5 360 aaKnown RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 CGREF1Q99674 301 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 GPATCH1Q9BRR8 931 aaKnown RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 FAIM2Q9BWQ8 316 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 EPB41L1Q9H4G0 881 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 SYNPO2LQ9H987 977 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 NANOGQ9H9S0 305 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 RXFP3Q9NSD7 469 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 PCDHGB4Q9UN71 923 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 WBP11Q9Y2W2 641 aaKnown RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 TMEM131Q92545 1883 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 CPED1A4D0V7 1026 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 FXYD1O00168 92 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 ENTPD5O75356 428 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 ERN1O75460 977 aaKnown RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 FURINP09958 794 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 FAM58BPP0C7Q3 252 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 ZNF10P21506 573 aaPredicted RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 MSX2P35548 267 aaPredicted RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 MLLT3P42568 568 aaPredicted RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 TSFMP43897 325 aaKnown RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 ERFP50548 548 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 ARFIP1P53367 373 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 TRA2BP62995 288 aaKnown RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 PHC1P78364 1004 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 GPLD1P80108 840 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 KLC1Q07866 573 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 C8orf82Q6P1X6 216 aaPredicted RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 TICAM1Q8IUC6 712 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 PLXDC1Q8IUK5 500 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 EID2Q8N6I1 236 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 ACOT4Q8N9L9 421 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 FAM156AQ8NDB6 213 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 OR4C6Q8NH72 309 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 TM4SF18Q96CE8 201 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 MTERF3Q96E29 417 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 SH3GL1Q99961 368 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 THUMPD3Q9BV44 507 aaKnown RBP16.49■□□□□ 0.23
CLDN4-201ENST00000340958 TRIM8Q9BZR9 551 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 ROGDIQ9GZN7 287 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 LHX9Q9NQ69 397 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 BCAP29Q9UHQ4 241 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 ATP6V1HQ9UI12 483 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 POMPQ9Y244 141 aa16.49■□□□□ 0.23
CLDN4-201ENST00000340958 PCDH15Q96QU1 1955 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 SNRNP200O75643 2136 aaKnown RBP16.48■□□□□ 0.23
CLDN4-201ENST00000340958 IGHV1OR21-1A0A087WYE8 117 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 A0A096LPI6 279 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 A0A0A6YYD5 115 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 PRSS51A0A1B0GVH4 220 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 TLCD2A6NGC4 264 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 ZSCAN9O15535 394 aaPredicted RBP16.48■□□□□ 0.23
CLDN4-201ENST00000340958 KIF1CO43896 1103 aaKnown RBP16.48■□□□□ 0.23
CLDN4-201ENST00000340958 TMPRSS11DO60235 418 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 MGRN1O60291 552 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 GSNP06396 782 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 EFNA1P20827 205 aaPredicted RBP16.48■□□□□ 0.23
CLDN4-201ENST00000340958 ATP5A1P25705 553 aaKnown RBP16.48■□□□□ 0.23
CLDN4-201ENST00000340958 DEFB110Q30KQ9 67 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 RABL3Q5HYI8 236 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 SNAP47Q5SQN1 464 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 DLEU7Q6UYE1 221 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 USP53Q70EK8 1073 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 SLC15A3Q8IY34 581 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 OR6C4Q8NGE1 309 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.48■□□□□ 0.23
CLDN4-201ENST00000340958 CCDC74AQ96AQ1 378 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 TM4SF19Q96DZ7 209 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 INPP5KQ9BT40 448 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 BHLHE41Q9C0J9 482 aaPredicted RBP16.48■□□□□ 0.23
CLDN4-201ENST00000340958 AICDAQ9GZX7 198 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 PRDM7Q9NQW5 492 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 FBXW2Q9UKT8 454 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 BTBD3Q9Y2F9 522 aa16.48■□□□□ 0.23
CLDN4-201ENST00000340958 GOLGA4Q13439 2230 aaKnown RBP16.47■□□□□ 0.23
CLDN4-201ENST00000340958 LNP1A1A4G5 178 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 PRORSD1PA6NEY8 169 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 P2RX6O15547 441 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 SIGLEC6O43699 453 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 GDF9O60383 454 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 KLHL18O94889 574 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 DDCP20711 480 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 CERS1P27544 350 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 MTPNP58546 118 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 LRRC74AQ0VAA2 488 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 FLOT2Q14254 428 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 ZNF793Q6ZN11 406 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 ZNF621Q6ZSS3 439 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 DGLUCYQ7Z3D6 616 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 CAMKMTQ7Z624 323 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 IFNEQ86WN2 208 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 MCATQ8IVS2 390 aaKnown RBP16.47■□□□□ 0.23
CLDN4-201ENST00000340958 AMER3Q8N944 861 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 UTP15Q8TED0 518 aaKnown RBP16.47■□□□□ 0.23
CLDN4-201ENST00000340958 TMEM125Q96AQ2 219 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 COQ8BQ96D53 544 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 CD180Q99467 661 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 ECSITQ9BQ95 431 aa16.47■□□□□ 0.23
CLDN4-201ENST00000340958 RAB33BQ9H082 229 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms