RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RNF11Q9Y3C5 154 aa14.48□□□□□ -0.09
VAPA-201ENST00000340541 WIPF3A6NGB9 483 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 MAGEB17A8MXT2 336 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 FAM227AF5H4B4 570 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 H0YIV9 168 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 B4GALT2O60909 372 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 SMIM24O75264 130 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 SEMA7AO75326 666 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 SERPINA7P05543 415 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 PRR35P0CG20 571 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 PYGBP11216 843 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 PCNAP12004 261 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 RNH1P13489 461 aaKnown RBP14.47□□□□□ -0.09
VAPA-201ENST00000340541 SLCO1A2P46721 670 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 PIK3CGP48736 1102 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 TRAF3Q13114 568 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 ABRAXAS2Q15018 415 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 PLEKHN1Q494U1 663 aaPredicted RBP14.47□□□□□ -0.09
VAPA-201ENST00000340541 IGFL2Q6UWQ7 119 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 CPEB2Q7Z5Q1 589 aaKnown RBP14.47□□□□□ -0.09
VAPA-201ENST00000340541 LURAP1LQ8IV03 231 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 CNPY4Q8N129 248 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 HUS1BQ8NHY5 278 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 EPS8L3Q8TE67 593 aaKnown RBP14.47□□□□□ -0.09
VAPA-201ENST00000340541 METTL21AQ8WXB1 218 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 TM9SF4Q92544 642 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 FAR2Q96K12 515 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 NPLQ9BXD5 320 aaPredicted RBP14.47□□□□□ -0.09
VAPA-201ENST00000340541 MFRPQ9BY79 579 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 NOL11Q9H8H0 719 aaKnown RBP14.47□□□□□ -0.09
VAPA-201ENST00000340541 PPCSQ9HAB8 311 aa14.47□□□□□ -0.09
VAPA-201ENST00000340541 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.47□□□□□ -0.09
VAPA-201ENST00000340541 V9GYY5 206 aaPredicted RBP14.47□□□□□ -0.09
VAPA-201ENST00000340541 IGKV3D-11A0A0A0MRZ8 115 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 A0A1B0GTL3 188 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 SEC24DO94855 1032 aaPredicted RBP14.46□□□□□ -0.09
VAPA-201ENST00000340541 CBX6O95503 412 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 TGFB1P01137 390 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 GSTA1P08263 222 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 JAK1P23458 1154 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 CERS1P27544 350 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 SERPINB1P30740 379 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 HPDP32754 393 aaPredicted RBP14.46□□□□□ -0.09
VAPA-201ENST00000340541 PIK3CBP42338 1070 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 MTTPP55157 894 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 BTG2P78543 158 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 NSDHLQ15738 373 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 EIF2S3LQ2VIR3 472 aaKnown RBP14.46□□□□□ -0.09
VAPA-201ENST00000340541 TMEM35AQ53FP2 167 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 KHDRBS2Q5VWX1 349 aaKnown RBP14.46□□□□□ -0.09
VAPA-201ENST00000340541 TRIM40Q6P9F5 258 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 ZNF793Q6ZN11 406 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 QSOX2Q6ZRP7 698 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 RPS27LQ71UM5 84 aaKnown RBP14.46□□□□□ -0.09
VAPA-201ENST00000340541 MYLK4Q86YV6 388 aaPredicted RBP14.46□□□□□ -0.09
VAPA-201ENST00000340541 KBTBD2Q8IY47 623 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 ZADH2Q8N4Q0 377 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 TMEM52Q8NDY8 209 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 WDR20Q8TBZ3 569 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 ZNF483Q8TF39 744 aaPredicted RBP14.46□□□□□ -0.09
VAPA-201ENST00000340541 SNRNP40Q96DI7 357 aaKnown RBP14.46□□□□□ -0.09
VAPA-201ENST00000340541 CDK15Q96Q40 435 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 SERINC2Q96SA4 455 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 TUBB6Q9BUF5 446 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 NTMT1Q9BV86 223 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 DMRT3Q9NQL9 472 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 KCMF1Q9P0J7 381 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 C19orf25Q9UFG5 118 aaPredicted RBP14.46□□□□□ -0.09
VAPA-201ENST00000340541 ADGRE2Q9UHX3 823 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 EMCNQ9ULC0 261 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 CLDN16Q9Y5I7 305 aa14.46□□□□□ -0.09
VAPA-201ENST00000340541 CPAMD8Q8IZJ3 1885 aa14.46□□□□□ -0.1
VAPA-201ENST00000340541 UNC79Q9P2D8 2635 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 RTCAO00442 366 aaKnown RBP14.45□□□□□ -0.1
VAPA-201ENST00000340541 PPP6CO00743 305 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 B3GALT2O43825 422 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 DLX3O60479 287 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 SH3BGRLO75368 114 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 SCELO95171 688 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 CLDN9O95484 217 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 NUDT17P0C025 328 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 MAOAP21397 527 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 SOX11P35716 441 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 HNRNPFP52597 415 aaKnown RBP14.45□□□□□ -0.1
VAPA-201ENST00000340541 RAB38P57729 211 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 ZRSR2Q15696 482 aaKnown RBP14.45□□□□□ -0.1
VAPA-201ENST00000340541 CPSF6Q16630 551 aaKnown RBP eCLIP14.45□□□□□ -0.1
VAPA-201ENST00000340541 ERCC6LQ2NKX8 1250 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 SFT2D3Q587I9 215 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 CRB2Q5IJ48 1285 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 DEPDC1Q5TB30 811 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 AGAP7PQ5VUJ5 663 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 RIPOR1Q6ZS17 1223 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 SCUBE1Q8IWY4 988 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 OR2W6PQ8NHA6 318 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 PRR7Q8TB68 274 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 BRIX1Q8TDN6 353 aaKnown RBP14.45□□□□□ -0.1
VAPA-201ENST00000340541 CMTM7Q96FZ5 175 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 PTCHD1Q96NR3 888 aa14.45□□□□□ -0.1
VAPA-201ENST00000340541 AGAP4Q96P64 663 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms