RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SYNDIG1LA6NDD5 238 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 CLDN4O14493 209 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 SLC28A2O43868 658 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 DLX3O60479 287 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 SH3BGRLO75368 114 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 MLYCDO95822 493 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 SBK3P0C264 359 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 TSFMP43897 325 aaKnown RBP18.07■□□□□ 0.48
SYNE4-202ENST00000340477 NAA20P61599 178 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 RHAGQ02094 409 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 ATG14Q6ZNE5 492 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 RIPOR1Q6ZS17 1223 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 LANCL3Q6ZV70 420 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 ANKRD37Q7Z713 158 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 CYP4X1Q8N118 509 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 C4orf33Q8N1A6 199 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 TMEM151AQ8N4L1 468 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 PLPP5Q8NEB5 264 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 RDH11Q8TC12 318 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 PTCHD1Q96NR3 888 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 QRFPRQ96P65 431 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 CDK15Q96Q40 435 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 SMAD5Q99717 465 aaKnown RBP18.07■□□□□ 0.48
SYNE4-202ENST00000340477 PRDM9Q9NQV7 894 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 RAB21Q9UL25 225 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 PLAAQ9Y263 795 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 MMACHCQ9Y4U1 282 aa18.07■□□□□ 0.48
SYNE4-202ENST00000340477 MASP2O00187 686 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 TBX6O95947 436 aaPredicted RBP18.06■□□□□ 0.48
SYNE4-202ENST00000340477 SERPINA7P05543 415 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 IMPDH1P20839 514 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 ARFIP1P53367 373 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 PRKAA2P54646 552 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 OR4D2P58180 307 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 RPS13P62277 151 aaKnown RBP18.06■□□□□ 0.48
SYNE4-202ENST00000340477 CLCQ05315 142 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 TRAF3Q13114 568 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 PCOLCEQ15113 449 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 ZNF678Q5SXM1 525 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 DEPDC1Q5TB30 811 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 FRG2Q64ET8 278 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 ZYG11AQ6WRX3 759 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 OR4F6Q8NGB9 312 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 TRPC4APQ8TEL6 797 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 TMEM237Q96Q45 408 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 FRG2BQ96QU4 278 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 SERPINI1Q99574 410 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 LPAR4Q99677 370 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 OR51B5Q9H339 312 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 EPS8L2Q9H6S3 715 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 ZBTB26Q9HCK0 441 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 LYRM4Q9HD34 91 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 LGALS13Q9UHV8 139 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 SNX6Q9UNH7 406 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 BOD1L1Q8NFC6 3051 aa18.06■□□□□ 0.48
SYNE4-202ENST00000340477 BLACEA4D250 179 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 CCDC151A5D8V7 595 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 FOXO6A8MYZ6 492 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 K7EM74 188 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 FOXE1O00358 373 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-202ENST00000340477 SAP18O00422 153 aaKnown RBP18.05■□□□□ 0.48
SYNE4-202ENST00000340477 ERLIN1O75477 346 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 SEC24DO94855 1032 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-202ENST00000340477 HIST1H1TP22492 207 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-202ENST00000340477 ATP5A1P25705 553 aaKnown RBP18.05■□□□□ 0.48
SYNE4-202ENST00000340477 CDH13P55290 713 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 LIM2P55344 173 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 RUNX2Q13950 521 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 EXT1Q16394 746 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 KRT71Q3SY84 523 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 SFT2D3Q587I9 215 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 CFAP157Q5JU67 520 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 JMJD6Q6NYC1 403 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-202ENST00000340477 ZNF595Q8IYB9 648 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 ZADH2Q8N4Q0 377 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 ACOT4Q8N9L9 421 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 FAM47BQ8NA70 645 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 MYRIPQ8NFW9 859 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 TSLPQ969D9 159 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 L3HYPDHQ96EM0 354 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 APOPT1Q96IL0 206 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 MESP1Q9BRJ9 268 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 ZNF552Q9H707 407 aaPredicted RBP18.05■□□□□ 0.48
SYNE4-202ENST00000340477 PRDM7Q9NQW5 492 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 PRTFDC1Q9NRG1 225 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 PSD3Q9NYI0 1048 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 TRPS1Q9UHF7 1281 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 PPT2Q9UMR5 302 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 DAPP1Q9UN19 280 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 CFAP46Q8IYW2 2715 aa18.05■□□□□ 0.48
SYNE4-202ENST00000340477 DOCK10Q96BY6 2186 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 OR2W5A6NFC9 320 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 PLIN3O60664 434 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 DNAJB6O75190 326 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 KRT6AP02538 564 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 PROCP04070 461 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 PDGFAP04085 211 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 KRT6BP04259 564 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 PRR35P0CG20 571 aa18.04■□□□□ 0.48
SYNE4-202ENST00000340477 TSPAN8P19075 237 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms