RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 IRAK1BP1Q5VVH5 260 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 LIPJQ5W064 366 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 B3GNTL1Q67FW5 361 aaPredicted RBP14.33□□□□□ -0.12
PRKN-201ENST00000338468 TRIM40Q6P9F5 258 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 LINC00696Q6ZRV3 163 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 CUZD1Q86UP6 607 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 ZADH2Q8N4Q0 377 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 SIRT6Q8N6T7 355 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 L3MBTL4Q8NA19 623 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 OR52B6Q8NGF0 335 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 HUS1BQ8NHY5 278 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 UBE2E3Q969T4 207 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 FAR2Q96K12 515 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 NSUN5Q96P11 429 aaKnown RBP14.33□□□□□ -0.12
PRKN-201ENST00000338468 LMF1Q96S06 567 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 SERINC2Q96SA4 455 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 MRPL46Q9H2W6 279 aaKnown RBP14.33□□□□□ -0.12
PRKN-201ENST00000338468 IPPKQ9H8X2 491 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 NECTIN3Q9NQS3 549 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 TMEM216Q9P0N5 145 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 PTGFRNQ9P2B2 879 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 PSMC3IPQ9P2W1 217 aaPredicted RBP14.33□□□□□ -0.12
PRKN-201ENST00000338468 PCTPQ9UKL6 214 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 RNF11Q9Y3C5 154 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 TSC22D4Q9Y3Q8 395 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 ANGPTL3Q9Y5C1 460 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 SHANK1Q9Y566 2161 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 CNTRLQ7Z7A1 2325 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 CPAMD8Q8IZJ3 1885 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 FOXO6A8MYZ6 492 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 H0YIV9 168 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 RTCAO00442 366 aaKnown RBP14.32□□□□□ -0.12
PRKN-201ENST00000338468 CYR61O00622 381 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 B3GALT2O43825 422 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 PRMT3O60678 531 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 UGDHO60701 494 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 SH3BGRLO75368 114 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 TGFB1P01137 390 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 RPS17P08708 135 aaKnown RBP14.32□□□□□ -0.12
PRKN-201ENST00000338468 ICAM2P13598 275 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 UQCRFS1P47985 274 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 MTTPP55157 894 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 LIM2P55344 173 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 RAB38P57729 211 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 INPP5JQ15735 1006 aaPredicted RBP14.32□□□□□ -0.12
PRKN-201ENST00000338468 PAPD4Q6PIY7 484 aaKnown RBP14.32□□□□□ -0.12
PRKN-201ENST00000338468 SH2D5Q6ZV89 423 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 RPS27LQ71UM5 84 aaKnown RBP14.32□□□□□ -0.12
PRKN-201ENST00000338468 SCUBE1Q8IWY4 988 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 CPT1CQ8TCG5 803 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 PPP4R1Q8TF05 950 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 SSC4DQ8WTU2 575 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 TM9SF4Q92544 642 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 PTCHD1Q96NR3 888 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 CDK15Q96Q40 435 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 CSF3RQ99062 836 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 OR51B5Q9H339 312 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 NOL11Q9H8H0 719 aaKnown RBP14.32□□□□□ -0.12
PRKN-201ENST00000338468 ACTR8Q9H981 624 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 SLAMF7Q9NQ25 335 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 DMRT3Q9NQL9 472 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 PRDM9Q9NQV7 894 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 KCMF1Q9P0J7 381 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 TMCO1Q9UM00 188 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 DAPP1Q9UN19 280 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 PCDHGA10Q9Y5H3 936 aa14.32□□□□□ -0.12
PRKN-201ENST00000338468 IQANK1A0A1B0GTG1 560 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 A0A1B0GTL3 188 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 A0A1W2PPM1 405 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 TCRBV16S1A1N1A0A5B0 115 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 A8MT66 165 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 GOLGA8RI6L899 631 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 PSMD12O00232 456 aaPredicted RBP14.31□□□□□ -0.12
PRKN-201ENST00000338468 SAP18O00422 153 aaKnown RBP14.31□□□□□ -0.12
PRKN-201ENST00000338468 SMIM24O75264 130 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 SCELO95171 688 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 ATP5A1P25705 553 aaKnown RBP14.31□□□□□ -0.12
PRKN-201ENST00000338468 SERPINB1P30740 379 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 HPDP32754 393 aaPredicted RBP14.31□□□□□ -0.12
PRKN-201ENST00000338468 PIK3CBP42338 1070 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 PIK3CGP48736 1102 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 OR4D2P58180 307 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 VSNL1P62760 191 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 TRAF3Q13114 568 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 BTBD16Q32M84 506 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 TMEM35AQ53FP2 167 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 DEPDC1Q5TB30 811 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 KHDRBS2Q5VWX1 349 aaKnown RBP14.31□□□□□ -0.12
PRKN-201ENST00000338468 H3F3CQ6NXT2 135 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 MYLK4Q86YV6 388 aaPredicted RBP14.31□□□□□ -0.12
PRKN-201ENST00000338468 CYP4X1Q8N118 509 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 FAM47BQ8NA70 645 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 GALNT11Q8NCW6 608 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 CATSPER1Q8NEC5 780 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 WDR20Q8TBZ3 569 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 ZNF483Q8TF39 744 aaPredicted RBP14.31□□□□□ -0.12
PRKN-201ENST00000338468 C19orf60Q96EN9 201 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 CMTM7Q96FZ5 175 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 KCNC2Q96PR1 638 aa14.31□□□□□ -0.12
PRKN-201ENST00000338468 MTERF1Q99551 399 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms