RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TPRG1LQ5T0D9 272 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 FN3KQ9H479 309 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 KCNIP3Q9Y2W7 256 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 YKT6O15498 198 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 ABCB7O75027 752 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 HLA-DPB1P04440 258 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 PITRM1Q5JRX3 1037 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 ZNF782Q6ZMW2 699 aaPredicted RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 KCT2Q8NC54 265 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 OR8J3Q8NGG0 315 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 ZNF689Q96CS4 500 aaPredicted RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 SHOX2O60902 331 aaPredicted RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 ACRV1P26436 265 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 NFE2L1Q14494 772 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 SH3PXD2AQ5TCZ1 1133 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 ASPGQ86U10 573 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 KLK6Q92876 244 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 MMABQ96EY8 250 aaPredicted RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 KLHL21Q9UJP4 597 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 PTBP2Q9UKA9 531 aaKnown RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 GPR34Q9UPC5 381 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 R3HDM2Q9Y2K5 976 aaKnown RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 RGPD3A6NKT7 1758 aaPredicted RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 IRS2Q9Y4H2 1338 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 MID1O15344 667 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 TNFSF4P23510 183 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 THBS2P35442 1172 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 RBPJQ06330 500 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 SHKBP1Q8TBC3 707 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 CGREF1Q99674 301 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 TM9SF3Q9HD45 589 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 PCDHB14Q9Y5E9 798 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 STYXL1Q9Y6J8 313 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 C5orf51A6NDU8 294 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 UBL4AP11441 157 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 CSTF1Q05048 431 aaKnown RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 ARL6IP1Q15041 203 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 LY6G5CQ5SRR4 150 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 IDNKQ5T6J7 187 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 TXNDC8Q6A555 127 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 RNF111Q6ZNA4 994 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 MFSD2AQ8NA29 543 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 SLC35B2Q8TB61 432 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 FANK1Q8TC84 345 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 PITHD1Q9GZP4 211 aaPredicted RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 EXOSC1Q9Y3B2 195 aaKnown RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 EFCAB7A8K855 629 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 CCNKO75909 580 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 CLDN7O95471 211 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 TIMP1P01033 207 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 IFNA7P01567 189 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 LRRC25Q8N386 305 aaPredicted RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 XPNPEP1Q9NQW7 623 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 PCDHGA10Q9Y5H3 936 aa11.84□□□□□ -0.51
FN1-202ENST00000336916 MDC1Q14676 2089 aaKnown RBP11.84□□□□□ -0.51
FN1-202ENST00000336916 DISC1C4P0D8 188 aa11.83□□□□□ -0.51
FN1-202ENST00000336916 ZNF878C9JN71 531 aa11.83□□□□□ -0.51
FN1-202ENST00000336916 RAD51DO75771 328 aa11.83□□□□□ -0.51
FN1-202ENST00000336916 CD9P21926 228 aa11.83□□□□□ -0.51
FN1-202ENST00000336916 GRM7Q14831 915 aa11.83□□□□□ -0.51
FN1-202ENST00000336916 THAP6Q8TBB0 222 aa11.83□□□□□ -0.51
FN1-202ENST00000336916 NAT6Q93015 286 aa11.83□□□□□ -0.51
FN1-202ENST00000336916 ARL5BQ96KC2 179 aa11.83□□□□□ -0.51
FN1-202ENST00000336916 DEFB126Q9BYW3 111 aa11.83□□□□□ -0.51
FN1-202ENST00000336916 EDNRAP25101 427 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 SLC25A11Q02978 314 aaKnown RBP11.83□□□□□ -0.52
FN1-202ENST00000336916 GRIK2Q13002 908 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 GFOD2Q3B7J2 385 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 OR5P2Q8WZ92 322 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 VRK1Q99986 396 aaPredicted RBP11.83□□□□□ -0.52
FN1-202ENST00000336916 UCK2Q9BZX2 261 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 ZNF99A8MXY4 864 aaPredicted RBP11.83□□□□□ -0.52
FN1-202ENST00000336916 hCG_2039718K7EN88 272 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 PIRO00625 290 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 TFECO14948 347 aaPredicted RBP11.83□□□□□ -0.52
FN1-202ENST00000336916 P04436 131 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 SSX6Q7RTT6 188 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 NLGN2Q8NFZ4 835 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 AKTIPQ9H8T0 292 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 BRD7Q9NPI1 651 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 TRPM3Q9HCF6 1732 aaPredicted RBP11.83□□□□□ -0.52
FN1-202ENST00000336916 A0A1W2PRQ8 180 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 CD48P09326 243 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 HOXC13P31276 330 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 PRRT3Q5FWE3 981 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 GOLM1Q8NBJ4 401 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 PSD4Q8NDX1 1056 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 MROQ9BYG7 248 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 POU2F3Q9UKI9 436 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 TCRBV21S2A2A0A5A6 115 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 RCCD1A6NED2 376 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 SAP18O00422 153 aaKnown RBP11.83□□□□□ -0.52
FN1-202ENST00000336916 FAM155BO75949 473 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 BCHEP06276 602 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 CDKL1Q00532 357 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 E2F1Q01094 437 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 TCEAL1Q15170 157 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 PERM1Q5SV97 790 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 SAPCD2Q86UD0 394 aa11.83□□□□□ -0.52
FN1-202ENST00000336916 LGI4Q8N135 537 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms