RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 A0A1W2PRB8 838 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 TMEM247A6NEH6 219 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 VILLO15195 856 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 ALPLP05186 524 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 PPM1FP49593 454 aaPredicted RBP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 TP53BP2Q13625 1128 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 SLC9B2Q86UD5 537 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 PAPD5Q8NDF8 572 aaKnown RBP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 CNIH3Q8TBE1 160 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 DCUN1D5Q9BTE7 237 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 DPH7Q9BTV6 452 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 MENTQ9BUN1 341 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 TPSD1Q9BZJ3 242 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 NAA50Q9GZZ1 169 aaKnown RBP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 RASSF1Q9NS23 344 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 TMEM184CQ9NVA4 438 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 PADI4Q9UM07 663 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 MUC22E2RYF6 1773 aaPredicted RBP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 HAT1O14929 419 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 XPNPEP2O43895 674 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 GCM2O75603 506 aaPredicted RBP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 HNRNPCP07910 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 PRPH2P23942 346 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 RPL5P46777 297 aaKnown RBP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 HTR4Q13639 388 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 RAB30Q15771 203 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 HORMAD1Q86X24 394 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 OR5D16Q8NGK9 328 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 ZFP90Q8TF47 636 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 BRF2Q9HAW0 419 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 SIRT5Q9NXA8 310 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 OBP2AQ9NY56 170 aa12.01□□□□□ -0.49
LIMK1-201ENST00000336180 SAMHD1Q9Y3Z3 626 aaKnown RBP12.01□□□□□ -0.49
LIMK1-201ENST00000336180 ZNF860A6NHJ4 632 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 M0QX08 132 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 PVRP15151 417 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 BCL6P41182 706 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 PSMD7P51665 324 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 OLR1P78380 273 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 CTBSQ01459 385 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 CYP4Z1Q86W10 505 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 LAS2Q8IYD9 372 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 VPS37AQ8NEZ2 397 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 OR8J2Q8NGG1 315 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 ZCCHC10Q8TBK6 192 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 ARSGQ96EG1 525 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 TEFMQ96QE5 360 aaKnown RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 MBOAT4Q96T53 435 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 CCDC90BQ9GZT6 254 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 BTBD1Q9H0C5 482 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 ZNF696Q9H7X3 374 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 LHX9Q9NQ69 397 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 FAM120CQ9NX05 1096 aaKnown RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 PDP1Q9P0J1 537 aaPredicted RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 DNAJB9Q9UBS3 223 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 CNOT11Q9UKZ1 510 aaKnown RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 CYP8B1Q9UNU6 501 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 ICKQ9UPZ9 632 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 NDUFS4O43181 175 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 DNAJB6O75190 326 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 SSR2P43308 183 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 CDK9P50750 372 aaKnown RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 CCR8P51685 355 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 CSNK1G2P78368 415 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 DYNC1I2Q13409 638 aaKnown RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 LRRC32Q14392 662 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 SMU1Q2TAY7 513 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 SPDYE7PQ495Y7 208 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 ZNF362Q5T0B9 420 aaPredicted RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 KHDRBS2Q5VWX1 349 aaKnown RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 PHF6Q8IWS0 365 aaKnown RBP eCLIP12□□□□□ -0.49
LIMK1-201ENST00000336180 NLGN4XQ8N0W4 816 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 KRT78Q8N1N4 520 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 OR2A1Q8NGT9 310 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 SMPDL3AQ92484 453 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 REPS1Q96D71 796 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 MPP4Q96JB8 637 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 RIPOR3Q96MK2 946 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 CCDC115Q96NT0 180 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 GAS2L1Q99501 681 aaPredicted RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 AIF1LQ9BQI0 150 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 C1QTNF2Q9BXJ5 285 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 MUC13Q9H3R2 512 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 CLK4Q9HAZ1 481 aaKnown RBP12□□□□□ -0.49
LIMK1-201ENST00000336180 KCNK12Q9HB15 430 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 EQTNQ9NQ60 294 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 CDC14AQ9UNH5 594 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 PCDHGA8Q9Y5G5 932 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 KIAA1549LQ6ZVL6 1849 aa12□□□□□ -0.49
LIMK1-201ENST00000336180 C1orf226A1L170 272 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 CACNB4O00305 520 aaPredicted RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 ERI3O43414 337 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 EIF2S1P05198 315 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 POU2F2P09086 479 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 PEBP1P30086 187 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 FMO3P31513 532 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 TRIM23P36406 574 aa11.99□□□□□ -0.49
LIMK1-201ENST00000336180 FEN1P39748 380 aaKnown RBP11.99□□□□□ -0.49
LIMK1-201ENST00000336180 ALDH3A2P51648 485 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms