RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 RNASET2O00584 256 aaKnown RBP22.61■■□□□ 1.21
TSKU-201ENST00000333090 MPC1LP0DKB6 136 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 ACLYP53396 1101 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 PSPHP78330 225 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 PTSQ03393 145 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 NAE1Q13564 534 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 TRAF7Q6Q0C0 670 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 TPRG1Q6ZUI0 275 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 SIMC1Q8NDZ2 872 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 BRD9Q9H8M2 597 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 NMNAT1Q9HAN9 279 aaPredicted RBP22.61■■□□□ 1.21
TSKU-201ENST00000333090 DNAJC27Q9NZQ0 273 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 RAB23Q9ULC3 237 aa22.61■■□□□ 1.21
TSKU-201ENST00000333090 A8MVJ9 347 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 UGDHO60701 494 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 LHCGRP22888 699 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 TUFMP49411 452 aaKnown RBP22.6■■□□□ 1.21
TSKU-201ENST00000333090 CDK6Q00534 326 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 SPHARQ15513 63 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 VN1R5Q7Z5H4 357 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 HS6ST3Q8IZP7 471 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 FAM46DQ8NEK8 389 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 OR7G1Q8NGA0 311 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 OVCA2Q8WZ82 227 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 ENOPH1Q9UHY7 261 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 NINQ8N4C6 2090 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 CSO75390 466 aaKnown RBP22.6■■□□□ 1.21
TSKU-201ENST00000333090 IGSF6O95976 241 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 C1SP09871 688 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 SCN1BQ07699 218 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 FAM131AQ6UXB0 335 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 CAMKMTQ7Z624 323 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 EXO1Q9UQ84 846 aaKnown RBP22.6■■□□□ 1.21
TSKU-201ENST00000333090 MAU2Q9Y6X3 613 aa22.6■■□□□ 1.21
TSKU-201ENST00000333090 FADS2P1A8MWK0 482 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 MYCP01106 439 aaPredicted RBP22.59■■□□□ 1.21
TSKU-201ENST00000333090 CYP17A1P05093 508 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 ATP1B2P14415 290 aaPredicted RBP22.59■■□□□ 1.21
TSKU-201ENST00000333090 MAPK8P45983 427 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 LIMS1P48059 325 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 RHAGQ02094 409 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 MADCAM1Q13477 382 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 UBE2J2Q8N2K1 259 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 OR52N2Q8NGI0 321 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 HUS1BQ8NHY5 278 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 FOXJ1Q92949 421 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 CLP1Q92989 425 aaKnown RBP22.59■■□□□ 1.21
TSKU-201ENST00000333090 TMEM161AQ9NX61 479 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 TMPRSS11EQ9UL52 423 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 CCDC182A6NF36 153 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 SOX14O95416 240 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 CRYBB2P43320 205 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 SLC7A6Q92536 515 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 CIDECQ96AQ7 238 aaPredicted RBP22.59■■□□□ 1.21
TSKU-201ENST00000333090 SLC22A12Q96S37 553 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 ZNF106Q9H2Y7 1883 aaKnown RBP22.59■■□□□ 1.21
TSKU-201ENST00000333090 RERGLQ9H628 205 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 CMAHPQ9Y471 501 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 ALPK3Q96L96 1907 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 FRMPD3Q5JV73 1810 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 IGLV3-16A0A075B6K0 115 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 TRBC2A0A5B9 178 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 TNFRSF10AO00220 468 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 SLC16A5O15375 505 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 ALX3O95076 343 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 CSTF2P33240 577 aaKnown RBP eCLIP22.59■■□□□ 1.21
TSKU-201ENST00000333090 ZNF33BQ06732 778 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 HYAL2Q12891 473 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 PPP2R2DQ66LE6 453 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 ZNF438Q7Z4V0 828 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 NOXA1Q86UR1 476 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 SCRN2Q96FV2 425 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 PKP4Q99569 1192 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 SLC22A4Q9H015 551 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 SEC14L4Q9UDX3 406 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 ABT1Q9ULW3 272 aaKnown RBP22.59■■□□□ 1.21
TSKU-201ENST00000333090 LSM2Q9Y333 95 aaKnown RBP22.59■■□□□ 1.21
TSKU-201ENST00000333090 ENPP4Q9Y6X5 453 aa22.59■■□□□ 1.21
TSKU-201ENST00000333090 ZNF670-ZNF695F2Z2N8 137 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 H0YIV9 168 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 TLR4O00206 839 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 CSF2P04141 144 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 FHP07954 510 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 TIA1P31483 386 aaKnown RBP eCLIP22.58■■□□□ 1.21
TSKU-201ENST00000333090 CHI3L1P36222 383 aaPredicted RBP22.58■■□□□ 1.21
TSKU-201ENST00000333090 ALDH9A1P49189 494 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 CD83Q01151 205 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 PLEKHS1Q5SXH7 462 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 GRHL2Q6ISB3 625 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 OR7G3Q8NG95 312 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 POLR2J2Q9GZM3 115 aaKnown RBP22.58■■□□□ 1.21
TSKU-201ENST00000333090 TRPV5Q9NQA5 729 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 C1GALT1Q9NS00 363 aa22.58■■□□□ 1.21
TSKU-201ENST00000333090 ARHGEF33A8MVX0 844 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 ZNF821O75541 412 aaPredicted RBP22.58■■□□□ 1.2
TSKU-201ENST00000333090 YES1P07947 543 aa22.58■■□□□ 1.2
TSKU-201ENST00000333090 IGFBP1P08833 259 aaPredicted RBP22.58■■□□□ 1.2
TSKU-201ENST00000333090 PIPP12273 146 aaPredicted RBP22.58■■□□□ 1.2
TSKU-201ENST00000333090 RPS5P46782 204 aaKnown RBP22.58■■□□□ 1.2
TSKU-201ENST00000333090 HMGA2P52926 109 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms