RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 GCNT6Q5T4J0 391 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 FAM71E1Q6IPT2 247 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 DSG4Q86SJ6 1040 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 IPCEF1Q8WWN9 437 aaPredicted RBP12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 TRIM43Q96BQ3 446 aaPredicted RBP12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 SPATA9Q9BWV2 254 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 INIPQ9NRY2 104 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 NFKBIL1Q9UBC1 381 aaPredicted RBP12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 RAB23Q9ULC3 237 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 CORO2BQ9UQ03 480 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 LTBP2Q14767 1821 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 NUMA1Q14980 2115 aa12.84□□□□□ -0.35
TUBA1B-201ENST00000332858 GPR37L1O60883 481 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 PTHP01270 115 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 GABRB1P18505 474 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 PPIBP23284 216 aaKnown RBP12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 CDK6Q00534 326 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 CBX3Q13185 183 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 FAM83HQ6ZRV2 1179 aaPredicted RBP12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 PLD3Q8IV08 490 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 LAS2Q8IYD9 372 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 CADM3Q8N126 398 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 PHF10Q8WUB8 498 aaKnown RBP12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 SLC38A4Q969I6 547 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 NXPE3Q969Y0 559 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 DTD2Q96FN9 168 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 BCL7BQ9BQE9 202 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 SGPP1Q9BX95 441 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 C5AR2Q9P296 337 aa12.83□□□□□ -0.35
TUBA1B-201ENST00000332858 DOCK9Q9BZ29 2069 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 PTPRSQ13332 1948 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 CLCA1A8K7I4 914 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 QSOX1O00391 747 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 KPNA4O00629 521 aaPredicted RBP12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 ZNF197O14709 1029 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 ADAMDEC1O15204 470 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 AIREO43918 545 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 MMP20O60882 483 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 TBX6O95947 436 aaPredicted RBP12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 SOAT1P35610 550 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 CHI3L1P36222 383 aaPredicted RBP12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 PDE7AQ13946 482 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 DMC1Q14565 340 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 TIGD6Q17RP2 521 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 RPS26P11Q5JNZ5 115 aaPredicted RBP12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 COQ10AQ96MF6 247 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 DSN1Q9H410 356 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 TAS2R9Q9NYW1 312 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 SNX8Q9Y5X2 465 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 CLDN24A6NM45 220 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 PRRT4C9JH25 899 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 TGM1P22735 817 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 CLK1P49759 484 aaKnown RBP12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 RAET1GQ6H3X3 334 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 OR9A1PQ8NGU1 263 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 SLC5A11Q8WWX8 675 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 OR51E2Q9H255 320 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 SLAMF7Q9NQ25 335 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 TAAR2Q9P1P5 351 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 TMEM98Q9Y2Y6 226 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 DYRK1BQ9Y463 629 aa12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 CFAP20Q9Y6A4 193 aaKnown RBP12.83□□□□□ -0.36
TUBA1B-201ENST00000332858 FOXE1O00358 373 aaPredicted RBP12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 TLL1O43897 1013 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 CDK1P06493 297 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 CLTBP09497 229 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 CISD3P0C7P0 127 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 IMPDH2P12268 514 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 ST3GAL4Q11206 333 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 PUM1Q14671 1186 aaKnown RBP eCLIP12.82□□□□□ -0.362e-6■□□□□ 8.9
TUBA1B-201ENST00000332858 DHCR24Q15392 516 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 ERAP2Q6P179 960 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 NXPE4Q6UWF7 544 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 GRASPQ7Z6J2 395 aaPredicted RBP12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 MCFD2Q8NI22 146 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 PSMA8Q8TAA3 256 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 ZFYVE19Q96K21 471 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 WFDC6Q9BQY6 131 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 EHD1Q9H4M9 534 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 CXorf36Q9H7Y0 433 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 DKK3Q9UBP4 350 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 KLF15Q9UIH9 416 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 EYSQ5T1H1 3165 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 A0A0C4DFX4 3053 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 LOC100506127A0A0U1RQW1 187 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 A0A1W2PRB8 838 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 FFAR1O14842 300 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 SEMA7AO75326 666 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 POP7O75817 140 aaKnown RBP12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 GASTP01350 101 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 DBTP11182 482 aaKnown RBP12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 PTPN2P17706 415 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 EPHA5P54756 1037 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 ELP6Q0PNE2 266 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 FADDQ13158 208 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 SLC13A2Q13183 592 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 PTGES3Q15185 160 aaKnown RBP12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 LEXMQ3ZCV2 418 aa12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 SLC44A2Q8IWA5 706 aaPredicted RBP12.82□□□□□ -0.36
TUBA1B-201ENST00000332858 OR5AR1Q8NGP9 310 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms