RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TRIM16LQ309B1 348 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 UGT3A2Q3SY77 523 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 TMEM102Q8N9M5 508 aaPredicted RBP15.18■□□□□ 0.02
PDGFB-201ENST00000331163 LINC01555Q8NAE3 123 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 BPIFB6Q8NFQ5 453 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 RAB8BQ92930 207 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 BRINP2Q9C0B6 783 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 HPCAL1P37235 193 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 HNRNPKP61978 463 aaKnown RBP eCLIP15.18■□□□□ 0.02
PDGFB-201ENST00000331163 SPIDRQ14159 915 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 ZNF750Q32MQ0 723 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 TRIM61Q5EBN2 209 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 GALNT18Q6P9A2 607 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 SPATA19Q7Z5L4 167 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 CHERPQ8IWX8 916 aaKnown RBP15.18■□□□□ 0.02
PDGFB-201ENST00000331163 CCDC116Q8IYX3 515 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 SLC22A18ASQ8N1D0 253 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 EID2Q8N6I1 236 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 AVL9Q8NBF6 648 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 ADNPQ9H2P0 1102 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 FBRSQ9HAH7 460 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 LRIT1Q9P2V4 623 aa15.18■□□□□ 0.02
PDGFB-201ENST00000331163 KIF26AQ9ULI4 1882 aaPredicted RBP15.17■□□□□ 0.02
PDGFB-201ENST00000331163 ZFC3H1O60293 1989 aaKnown RBP15.17■□□□□ 0.02
PDGFB-201ENST00000331163 LSM1O15116 133 aaKnown RBP15.17■□□□□ 0.02
PDGFB-201ENST00000331163 CLOCKO15516 846 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 SDC1P18827 310 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 ATP6V1B2P21281 511 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 CD97P48960 835 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 PGDP52209 483 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 MAPK11Q15759 364 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 CROCCP3Q8IVE0 287 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 SPPL2AQ8TCT8 520 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 UBE2E3Q969T4 207 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 LRRC58Q96CX6 371 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 DUSP26Q9BV47 211 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 A0A087WXM4 84 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 PRSS51A0A1B0GVH4 220 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 FUOMA2VDF0 154 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 TOR1BO14657 336 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 HAT1O14929 419 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 DIRAS1O95057 198 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 RGS1Q08116 209 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 SLCO4C1Q6ZQN7 724 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 HCN3Q9P1Z3 774 aa15.17■□□□□ 0.02
PDGFB-201ENST00000331163 B4GAT1O43505 415 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 EEDO75530 441 aaKnown RBP15.16■□□□□ 0.02
PDGFB-201ENST00000331163 EPN2O95208 641 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 C6orf47O95873 294 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 PORP16435 677 aaPredicted RBP15.16■□□□□ 0.02
PDGFB-201ENST00000331163 CERS1P27544 350 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 IL12AP29459 219 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 TRIM25Q14258 630 aaKnown RBP15.16■□□□□ 0.02
PDGFB-201ENST00000331163 TMEM53Q6P2H8 277 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 FIGLAQ6QHK4 219 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 FUNDC1Q8IVP5 155 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 PROKR1Q8TCW9 393 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 MAL2Q969L2 176 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 KLHL31Q9H511 634 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 ALG2Q9H553 416 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 RUVBL1Q9Y265 456 aaKnown RBP15.16■□□□□ 0.02
PDGFB-201ENST00000331163 PRORSD1PA6NEY8 169 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 AQP9O43315 295 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 OR1D5P58170 312 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 VAC14Q08AM6 782 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 PMS2P3Q13401 168 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 FZD2Q14332 565 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 BCL7AQ4VC05 210 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 LSRQ86X29 649 aaPredicted RBP15.16■□□□□ 0.02
PDGFB-201ENST00000331163 SLC7A5P1Q8MH63 180 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 TMCO5AQ8N6Q1 288 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 MAGEE2Q8TD90 523 aaPredicted RBP15.16■□□□□ 0.02
PDGFB-201ENST00000331163 MAP3K3Q99759 626 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 AIG1Q9NVV5 245 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 ACTR10Q9NZ32 417 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 MAN1A2O60476 641 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 CBFA2T3O75081 653 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 FGF4P08620 206 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 CHRM5P08912 532 aaPredicted RBP15.16■□□□□ 0.02
PDGFB-201ENST00000331163 CD27P26842 260 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 GFERP55789 205 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 EMX2Q04743 252 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 KIAA1614Q5VZ46 1190 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 OLIG3Q7RTU3 272 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 GKN2Q86XP6 184 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 SLC9A6Q92581 669 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 GAREM1Q9H706 876 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 ADAP2Q9NPF8 381 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 SACM1LQ9NTJ5 587 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 DAPK2Q9UIK4 370 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 SNX11Q9Y5W9 270 aa15.16■□□□□ 0.02
PDGFB-201ENST00000331163 SPTY2D1-AS1A0A0U1RR47 76 aa15.15■□□□□ 0.02
PDGFB-201ENST00000331163 C17orf113A0A1B0GUU1 675 aa15.15■□□□□ 0.02
PDGFB-201ENST00000331163 SHMT2P34897 504 aa15.15■□□□□ 0.02
PDGFB-201ENST00000331163 SLAMF1Q13291 335 aa15.15■□□□□ 0.02
PDGFB-201ENST00000331163 LAPTM4AQ15012 233 aa15.15■□□□□ 0.02
PDGFB-201ENST00000331163 Q6ZNX1 250 aa15.15■□□□□ 0.02
PDGFB-201ENST00000331163 SLC9B2Q86UD5 537 aa15.15■□□□□ 0.02
PDGFB-201ENST00000331163 KLHDC8AQ8IYD2 350 aa15.15■□□□□ 0.02
PDGFB-201ENST00000331163 FBXO15Q8NCQ5 510 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms