RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 LRTM1Q9HBL6 345 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 COQ3Q9NZJ6 369 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 MBD2Q9UBB5 411 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 DUX4Q9UBX2 424 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 EPHA6Q9UF33 1036 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 NDRG3Q9UGV2 375 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SCML1Q9UN30 329 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 CLCA3PQ9Y6N3 262 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SYNJ2BP-COX16A0A087WUM0 186 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 F8W810 466 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SMLR1H3BR10 107 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 M0R233 179 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 PIRO00625 290 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 OR7A17O14581 309 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SIGLEC6O43699 453 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 LZTS3O60299 673 aaPredicted RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 MMP20O60882 483 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 MPC2O95563 127 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 OLFM2O95897 454 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SULT1A3P0DMM9 295 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SULT1A4P0DMN0 295 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 EDNRBP24530 442 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 IRS1P35568 1242 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 C21orf58P58505 322 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 RPS14P62263 151 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 LRRC74AQ0VAA2 488 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 GTF2H2Q13888 395 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 ABRAXAS2Q15018 415 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 OCLNQ16625 522 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 ZNF284Q2VY69 593 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 GPR33Q49SQ1 333 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 FLYWCH1Q4VC44 716 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 PABPC1L2AQ5JQF8 200 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 FBXO47Q5MNV8 452 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 C9orf57Q5W0N0 161 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 GTF2H2CQ6P1K8 395 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 CNIH2Q6PI25 160 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 LRFN4Q6PJG9 635 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SCIMPQ6UWF3 145 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 MACC1Q6ZN28 852 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 GOLGA7Q7Z5G4 137 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 DNAJB7Q7Z6W7 309 aaPredicted RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 NAXDQ8IW45 347 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 TEX26Q8N6G2 289 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 CHST13Q8NET6 341 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 NELL1Q92832 810 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 USP7Q93009 1102 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 ZNF419Q96HQ0 510 aaPredicted RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 LINC00052Q96N35 136 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 FAM193BQ96PV7 902 aaPredicted RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 FAM129BQ96TA1 746 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 OSMRQ99650 979 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 NPAS1Q99742 590 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 NTMT1Q9BV86 223 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 POLR2J2Q9GZM3 115 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 MINDY3Q9H8M7 445 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 MCCC2Q9HCC0 563 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 AMBNQ9NP70 447 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 COX16Q9P0S2 106 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 UBQLN1Q9UMX0 589 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 CEP350Q5VT06 3117 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 LCTP09848 1927 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 OTOFQ9HC10 1997 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 ADM5C9JUS6 153 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 H3BM21 787 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 J3KR12 359 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 AIPO00170 330 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 RFXANKO14593 260 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SCAMP3O14828 347 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 SLC28A2O43868 658 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 AP2A2O94973 939 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 GLUD1P00367 558 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 IQCF3P0C7M6 154 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 EBLN1P0CF75 366 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 TYRP14679 529 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 DARSP14868 501 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 RORAP35398 523 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 PIK3CGP48736 1102 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 TGM4P49221 684 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 AGTR2P50052 363 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 HK3P52790 923 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 NUDT6P53370 316 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 DCDC1P59894 354 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 SRSF11Q05519 484 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 EIF4EBP2Q13542 120 aaPredicted RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 TPBGQ13641 420 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 PTGR1Q14914 329 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 DUOXA1Q1HG43 343 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 FAM219BQ5XKK7 198 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 EFCAB12Q6NXP0 572 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 DOK6Q6PKX4 331 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 AFTPHQ6ULP2 937 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 DLK2Q6UY11 383 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 PTCHD4Q6ZW05 846 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 USP45Q70EL2 814 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 MILR1Q7Z6M3 343 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 MCATQ8IVS2 390 aaKnown RBP8.05□□□□□ -1.12
SKA2-201ENST00000330137 STPG2Q8N412 459 aa8.05□□□□□ -1.12
SKA2-201ENST00000330137 LRRC71Q8N4P6 559 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms