RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 CLNKQ7Z7G1 428 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 ADAMTSL2Q86TH1 951 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 SCUBE1Q8IWY4 988 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 KLHDC8AQ8IYD2 350 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 KRT78Q8N1N4 520 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 ANKRD49Q8WVL7 239 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 SREK1Q8WXA9 508 aaKnown RBP23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 ANKRD7Q92527 254 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 MS4A6EQ96DS6 147 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 CAPZA3Q96KX2 299 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 SPOCK3Q9BQ16 436 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 TIMMDC1Q9NPL8 285 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 KCMF1Q9P0J7 381 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 ZNF223Q9UK11 482 aaPredicted RBP23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 MRPS33Q9Y291 106 aaKnown RBP23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 F8P00451 2351 aa23.34■■□□□ 1.33
PPP4R4-202ENST00000328839 A0A088AWK7 358 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 B3GALT2O43825 422 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 ZNF10P21506 573 aaPredicted RBP23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 HNRNPFP52597 415 aaKnown RBP23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 PLA2G16P53816 162 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 HSD17B7P56937 341 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 DR1Q01658 176 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 TLE4Q04727 773 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 CMPK2Q5EBM0 449 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 TMEM52Q8NDY8 209 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 RHBDF1Q96CC6 855 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 VPS39Q96JC1 886 aa23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 NPLQ9BXD5 320 aaPredicted RBP23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 LIN28AQ9H9Z2 209 aaKnown RBP23.33■■□□□ 1.33
PPP4R4-202ENST00000328839 ADGRG4Q8IZF6 3080 aa23.33■■□□□ 1.32
PPP4R4-202ENST00000328839 LRIT2A6NDA9 550 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 ANKDD1BA6NHY2 528 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 A8MVJ9 347 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 TGFBR3LH3BV60 316 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 ZSCAN12O43309 604 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 TUBB4AP04350 444 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 IFNA16P05015 189 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 SLC6A12P48065 614 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 PDIA2Q13087 525 aaKnown RBP23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 TRIM40Q6P9F5 258 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 C16orf47Q6ZP98 133 aaPredicted RBP23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 SYDE1Q6ZW31 735 aaPredicted RBP23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 ZFP62Q8NB50 900 aaPredicted RBP23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 FBXO36Q8NEA4 188 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 OR52N2Q8NGI0 321 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 C16orf52Q8NHV5 167 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 C14orf79Q96F83 325 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 TRIM31Q9BZY9 425 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 COPS7BQ9H9Q2 264 aaPredicted RBP23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 PRM3Q9NNZ6 103 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 ADAP2Q9NPF8 381 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 HPF1Q9NWY4 346 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 TRMT1Q9NXH9 659 aaKnown RBP23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 YARS2Q9Y2Z4 477 aaKnown RBP23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 EML6Q6ZMW3 1958 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 POLQO75417 2590 aa23.32■■□□□ 1.32
PPP4R4-202ENST00000328839 AKAP9Q99996 3911 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 USP27XA6NNY8 438 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 PRKNO60260 465 aaPredicted RBP23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 OR2J2O76002 312 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 ZFAND5O76080 213 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 TCP1P17987 556 aaKnown RBP23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 SLC12A2P55011 1212 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 BMPR2Q13873 1038 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 FRG1Q14331 258 aaKnown RBP23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 FASTKD3Q14CZ7 662 aaKnown RBP23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 PSD4Q8NDX1 1056 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 ASB15Q8WXK1 588 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 REXO4Q9GZR2 422 aaKnown RBP23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 ENKD1Q9H0I2 346 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 DEFB127Q9H1M4 99 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 WWOXQ9NZC7 414 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 HCFC1P51610 2035 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 CELSR1Q9NYQ6 3014 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 ZNF407Q9C0G0 2248 aa23.31■■□□□ 1.32
PPP4R4-202ENST00000328839 MYOCOSA0A1B0GUC4 107 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 CERS1P27544 350 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 PLGLB1Q02325 96 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 FBXO48Q5FWF7 155 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 TMEM211Q6ICI0 200 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 ARHGAP11AQ6P4F7 1023 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 IL20RBQ6UXL0 311 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 CAPN12Q6ZSI9 719 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 ZNF595Q8IYB9 648 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 MARVELD2Q8N4S9 558 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 OR2L5Q8NG80 312 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 CSF3RQ99062 836 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 TP63Q9H3D4 680 aaPredicted RBP23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 PPIEQ9UNP9 301 aaKnown RBP23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 CLDN16Q9Y5I7 305 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 HRH3Q9Y5N1 445 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 CLCA3PQ9Y6N3 262 aa23.3■■□□□ 1.32
PPP4R4-202ENST00000328839 FAM90A27PA6NNH2 459 aa23.29■■□□□ 1.32
PPP4R4-202ENST00000328839 FAM166BA8MTA8 275 aa23.29■■□□□ 1.32
PPP4R4-202ENST00000328839 CLGNO14967 610 aa23.29■■□□□ 1.32
PPP4R4-202ENST00000328839 CLEC3AO75596 197 aa23.29■■□□□ 1.32
PPP4R4-202ENST00000328839 CAPN3P20807 821 aa23.29■■□□□ 1.32
PPP4R4-202ENST00000328839 GSTM2P28161 218 aa23.29■■□□□ 1.32
PPP4R4-202ENST00000328839 HPDP32754 393 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms