RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 H7C417 338 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 VILLO15195 856 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 SPDEFO95238 335 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 M6PRP20645 277 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TAS2R50P59544 299 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 LCLAT1Q6UWP7 414 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ABHD13Q7L211 337 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 OR4K17Q8NGC6 315 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 NPLQ9BXD5 320 aaPredicted RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 ZCCHC3Q9NUD5 404 aaKnown RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 RCOR3Q9P2K3 495 aaPredicted RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 PADI3Q9ULW8 664 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 SRPRAP08240 638 aaKnown RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 GNAZP19086 355 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 SMSP52788 366 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 CRISP3P54108 245 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 RAB15P59190 212 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 DSTNP60981 165 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TMEM69Q5SWH9 247 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 CERS5Q8N5B7 392 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 PLA2G15Q8NCC3 412 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 SUN3Q8TAQ9 357 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ASB15Q8WXK1 588 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 CGREF1Q99674 301 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 METTL7AQ9H8H3 244 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 SLC28A3Q9HAS3 691 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 PCDHGB5Q9Y5G0 923 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 GOSR2O14653 212 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 HTRA2O43464 458 aaPredicted RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 SULT1B1O43704 296 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 BCHEP06276 602 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 RAB3BP20337 219 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ACVR1BP36896 505 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 CAMLGP49069 296 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ZNF367Q7RTV3 350 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 DPY19L4Q7Z388 723 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 SLAIN1Q8ND83 568 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TSTD1Q8NFU3 115 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 PRR11Q96HE9 360 aaPredicted RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 ZNF317Q96PQ6 595 aaPredicted RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 TMEM109Q9BVC6 243 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TMEM45AQ9NWC5 275 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 TAC3Q9UHF0 121 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 MDFIC2A0A1B0GVS7 189 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 A0A1W2PRB8 838 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 CLEC3AO75596 197 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 C8GP07360 202 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 GLP1RP43220 463 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 EXOC3L2Q2M3D2 409 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 PPP2R2DQ66LE6 453 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 PAQR3Q6TCH7 311 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 GALNT10Q86SR1 603 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 OR13C4Q8NGS5 318 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 OR5B12Q96R08 314 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 ZIM2Q9NZV7 527 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 RUVBL1Q9Y265 456 aaKnown RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 HEBP2Q9Y5Z4 205 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 UPK3BL1B0FP48 263 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 UPK3BL2E5RIL1 263 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 C22orf42Q6IC83 251 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 EPGNQ6UW88 154 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 NDNFQ8TB73 568 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 THAP3Q8WTV1 239 aaPredicted RBP7.64□□□□□ -1.19
CIITA-201ENST00000324288 CNTNAP3BQ96NU0 1288 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 BIN3Q9NQY0 253 aa7.64□□□□□ -1.19
CIITA-201ENST00000324288 CARNS1A5YM72 827 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 TGFB1I1O43294 461 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 IFNA17P01571 189 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 LAG3P18627 525 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 HERVK_113P63132 956 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CDK6Q00534 326 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 TATDN1Q6P1N9 297 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 COQ10AQ96MF6 247 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ERVK-6Q9BXR3 956 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 HMGXB4Q9UGU5 601 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 SH3BGRL2Q9UJC5 107 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 PTPRMP28827 1452 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 HMX3A6NHT5 357 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 LOC730098B7Z3J9 87 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CREG1O75629 220 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CST3P01034 146 aaPredicted RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 CSTBP04080 98 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 FHP07954 510 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 BCKDHAP12694 445 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 VIPR1P32241 457 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ALDH3B2P48448 385 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 PPA1Q15181 289 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 USP50Q70EL3 339 aaPredicted RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 KRTCAP2Q8N6L1 136 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 COL20A1Q9P218 1284 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ABCA9Q8IUA7 1624 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 MANBAO00462 879 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 LRCH4O75427 683 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 TMEM63AO94886 807 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 FGF19O95750 216 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 TACSTD2P09758 323 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ALPPL2P10696 532 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CASRP41180 1078 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 AQP2P41181 271 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 MAGEB1P43366 347 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms