RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 IRF8Q02556 426 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 SCARB2Q14108 478 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 ZNF852Q6ZMS4 543 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 GLCCI1Q86VQ1 547 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 PLCZ1Q86YW0 608 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 CREB3L4Q8TEY5 395 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 REPS1Q96D71 796 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 TMEM80Q96HE8 168 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 TMEM39AQ9NV64 488 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 RUVBL1Q9Y265 456 aaKnown RBP17.14■□□□□ 0.33
PRKCB-202ENST00000321728 FAM227AF5H4B4 570 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 MEN1O00255 615 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 PIPP12273 146 aaPredicted RBP17.14■□□□□ 0.33
PRKCB-202ENST00000321728 CCR7P32248 378 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 LEXMQ3ZCV2 418 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 NXPE1Q8N323 547 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 MAP6Q96JE9 813 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 MND1Q9BWT6 205 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 KLHL21Q9UJP4 597 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 AP1M2Q9Y6Q5 423 aa17.14■□□□□ 0.33
PRKCB-202ENST00000321728 MKI67P46013 3256 aaKnown RBP17.13■□□□□ 0.33
PRKCB-202ENST00000321728 A0A1B0GVM2 712 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 FADS2P1A8MWK0 482 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 NPIPB8E9PQR5 432 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 TLR4O00206 839 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 NOS1APO75052 506 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-202ENST00000321728 OR2B3O76000 313 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 PDE9AO76083 593 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 ANXA4P09525 319 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-202ENST00000321728 JUPP14923 745 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 CBLP22681 906 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 CPN2P22792 545 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 PKLRP30613 574 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 PCDH1Q08174 1060 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 DDI2Q5TDH0 399 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 LCN1P1Q5VSP4 162 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 LYPLAL1Q5VWZ2 237 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 C22orf42Q6IC83 251 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 ZNF557Q8N988 423 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-202ENST00000321728 NLGN4YQ8NFZ3 816 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-202ENST00000321728 BTN2A2Q8WVV5 523 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 NMNAT1Q9HAN9 279 aaPredicted RBP17.13■□□□□ 0.33
PRKCB-202ENST00000321728 NDUFB11Q9NX14 153 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 BTNL2Q9UIR0 455 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 TMPRSS11EQ9UL52 423 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 HSPB11Q9Y547 144 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 ALG5Q9Y673 324 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 MGAT4DA6NG13 374 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 SMLR1H3BR10 107 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 GJB5O95377 273 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 HBQ1P09105 142 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 IRF1P10914 325 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 SLC6A12P48065 614 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 XKR6Q5GH73 641 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 ANXA8L1Q5VT79 327 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 PAQR6Q6TCH4 344 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 FAM181AQ8N9Y4 354 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 ATP6V1C2Q8NEY4 427 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 FCRL1Q96LA6 429 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 DHRS9Q9BPW9 319 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 THSD1Q9NS62 852 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 SNX11Q9Y5W9 270 aa17.13■□□□□ 0.33
PRKCB-202ENST00000321728 TRBV5-4A0A0C4DH59 114 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 A8MVJ9 347 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 SOX14O95416 240 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 CBSLP0DN79 551 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 ALAS2P22557 587 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 ITGB7P26010 798 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 UQCRC1P31930 480 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 CBSP35520 551 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 C1DQ13901 141 aaKnown RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.12■□□□□ 0.331e-6■■□□□ 13.3
PRKCB-202ENST00000321728 CDKL4Q5MAI5 379 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 GCNT6Q5T4J0 391 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 C1orf52Q8N6N3 182 aaKnown RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 SPERTQ8NA61 448 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 C19orf18Q8NEA5 215 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 GPR156Q8NFN8 814 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 OR4K1Q8NGD4 311 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 GEMIN6Q8WXD5 167 aaKnown RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 ZIC5Q96T25 663 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 SLC12A9Q9BXP2 914 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 SLC25A19Q9HC21 320 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 GKN1Q9NS71 199 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 ING3Q9NXR8 418 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 ZNF282Q9UDV7 671 aaPredicted RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 PRELID1Q9Y255 219 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 CLCA3PQ9Y6N3 262 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 ALPK3Q96L96 1907 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 TRPM7Q96QT4 1865 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 TRAV19A0A0A6YYK7 116 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 PRAMEF33A0A0G2JMD5 474 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 GNG14A0A1W2PPG7 69 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 MYL12BO14950 172 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 POLR1CO15160 346 aaPredicted RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 TPST2O60704 377 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 PRAMEF10O60809 474 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 KLKB1P03952 638 aa17.12■□□□□ 0.33
PRKCB-202ENST00000321728 CORO1AP31146 461 aaKnown RBP17.12■□□□□ 0.33
PRKCB-202ENST00000321728 GKP32189 559 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms