RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 TSC22D4Q9Y3Q8 395 aa13.79□□□□□ -0.2
TUBA3D-201ENST00000321253 A8MT66 165 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 FAM227AF5H4B4 570 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 CLDN4O14493 209 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 CELA2AP08217 269 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 MAOAP21397 527 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 HSD17B3P37058 310 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 SSR2P43308 183 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 CD97P48960 835 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 MLLT10P55197 1068 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 BTG2P78543 158 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 MFAP5Q13361 173 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 AP5B1Q2VPB7 878 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 KHDRBS2Q5VWX1 349 aaKnown RBP13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 PLAG1Q6DJT9 500 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 TDRPQ86YL5 185 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 CYP4X1Q8N118 509 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 SIRT6Q8N6T7 355 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 L3MBTL4Q8NA19 623 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 OR52B6Q8NGF0 335 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 PPP4R1Q8TF05 950 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 MZB1Q8WU39 189 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 CDK15Q96Q40 435 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 LMF1Q96S06 567 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 WDR77Q9BQA1 342 aaPredicted RBP13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 OR51B5Q9H339 312 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 SEMA4BQ9NPR2 832 aaPredicted RBP13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 DMRT3Q9NQL9 472 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 DCDC2Q9UHG0 476 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 RNF11Q9Y3C5 154 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 MMACHCQ9Y4U1 282 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 V9GYY5 206 aaPredicted RBP13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 SPACA6W5XKT8 324 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 SCN2AQ99250 2005 aa13.78□□□□□ -0.2
TUBA3D-201ENST00000321253 SAP18O00422 153 aaKnown RBP13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 OR7A17O14581 309 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 CDH16O75309 829 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 SORBS2O94875 1100 aaKnown RBP13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 RPS17P08708 135 aaKnown RBP13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 SBK3P0C264 359 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 ITGAMP11215 1152 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 PTX3P26022 381 aaPredicted RBP13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 LIM2P55344 173 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 HERVK_113P63132 956 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 SLC13A2Q13183 592 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 ZRSR2Q15696 482 aaKnown RBP13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 DEPDC1Q5TB30 811 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 TTC19Q6DKK2 380 aaPredicted RBP13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 IGFL2Q6UWQ7 119 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 TMEM151AQ8N4L1 468 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 EFCAB3Q8N7B9 438 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 FAM47BQ8NA70 645 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 EPS8L3Q8TE67 593 aaKnown RBP13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 RGMAQ96B86 450 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 MAGEB10Q96LZ2 347 aaPredicted RBP13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 NSUN5Q96P11 429 aaKnown RBP13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 NTMT1Q9BV86 223 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 ERVK-6Q9BXR3 956 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 PRDM7Q9NQW5 492 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 PRTFDC1Q9NRG1 225 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 TEKT2Q9UIF3 430 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 DAPP1Q9UN19 280 aa13.77□□□□□ -0.21
TUBA3D-201ENST00000321253 BAHCC1Q9P281 2608 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 A0A1W2PPM1 405 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 DYTNA2CJ06 578 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 RTCAO00442 366 aaKnown RBP13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 GLRA3O75311 464 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 WISP1O95388 367 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 OTCP00480 354 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 HIST1H1TP22492 207 aaPredicted RBP13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 ATP5F1P24539 256 aaPredicted RBP13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 ATP5A1P25705 553 aaKnown RBP13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 TSFMP43897 325 aaKnown RBP13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 HSD17B7P56937 341 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 RPS13P62277 151 aaKnown RBP13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 RASA2Q15283 850 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 WDR93Q6P2C0 686 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 EMBQ6PCB8 327 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 UBE3DQ7Z6J8 389 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 MILR1Q7Z6M3 343 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 ZNF595Q8IYB9 648 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 IQCKQ8N0W5 287 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 RNF175Q8N4F7 328 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 ACOT4Q8N9L9 421 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 DNAJB14Q8TBM8 379 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 M1APQ8TC57 530 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 ZNF483Q8TF39 744 aaPredicted RBP13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 PSMF1Q92530 271 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 CNDP1Q96KN2 507 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 C1QTNF3Q9BXJ4 246 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 KCNK13Q9HB14 408 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 ZBTB26Q9HCK0 441 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 LYRM4Q9HD34 91 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 NECTIN3Q9NQS3 549 aa13.76□□□□□ -0.21
TUBA3D-201ENST00000321253 CNTRLQ7Z7A1 2325 aa13.75□□□□□ -0.21
TUBA3D-201ENST00000321253 IGKV3D-11A0A0A0MRZ8 115 aa13.75□□□□□ -0.21
TUBA3D-201ENST00000321253 TCRBV16S1A1N1A0A5B0 115 aa13.75□□□□□ -0.21
TUBA3D-201ENST00000321253 A8MUI8 341 aa13.75□□□□□ -0.21
TUBA3D-201ENST00000321253 SUPT7LO94864 414 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms