RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 HRGP04196 525 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 DGKQP52824 942 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 MAP2K5Q13163 448 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 CLCA4Q14CN2 919 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 EEF1DP3Q658K8 133 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 TRUB1Q8WWH5 349 aaKnown RBP16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 TOXO94900 526 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 TSPAN15O95858 294 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 SP2Q02086 613 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 SLC27A4Q6P1M0 643 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 TAC4Q86UU9 113 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 PYCR2Q96C36 320 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 TCEAL7Q9BRU2 100 aa16.31■□□□□ 0.2
SMCHD1-201ENST00000320876 CHRNA1P02708 482 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 MAGEA3P43357 314 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 GOLGA7Q7Z5G4 137 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 DENND1AQ8TEH3 1009 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 FN3KQ9H479 309 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 KLF15Q9UIH9 416 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 DCAF12L1Q5VU92 463 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 BIN3Q9NQY0 253 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 ZNF701Q9NV72 531 aaPredicted RBP16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 BRCC3P46736 316 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 IRF5Q13568 498 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 PCLAFQ15004 111 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 ZDHHC24Q6UX98 284 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 ICKQ9UPZ9 632 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 NEURL4Q96JN8 1562 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 PAHP00439 452 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 HSD11B2P80365 405 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 RBM23Q86U06 439 aaKnown RBP16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 NLGN2Q8NFZ4 835 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 AUTS2Q8WXX7 1259 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 A0A0J9YVX5 310 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 PXKQ7Z7A4 578 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 OR13C3Q8NGS6 347 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 CDC14AQ9UNH5 594 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 AMY2BP19961 511 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 IGFBP4P22692 258 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 FRKP42685 505 aaPredicted RBP16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 C1orf52Q8N6N3 182 aaKnown RBP16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 LIN28AQ9H9Z2 209 aaKnown RBP16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 SLC22A14Q9Y267 594 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 CST3P01034 146 aaPredicted RBP16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 GP1BBP13224 206 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 CTSOP43234 321 aaPredicted RBP16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 ACTBP60709 375 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 ACTG1P63261 375 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 DUSP28Q4G0W2 176 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 PRAMEF19Q5SWL8 479 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 CILP2Q8IUL8 1156 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 TCEANCQ8N8B7 351 aa16.3■□□□□ 0.2
SMCHD1-201ENST00000320876 ADM5C9JUS6 153 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 G6PDP11413 515 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 ARL2P36404 184 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 RAB41Q5JT25 222 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 THOC6Q86W42 341 aaKnown RBP16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 IL12RB2Q99665 862 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 PIP5K1AQ99755 562 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 WDR26Q9H7D7 661 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 ATP1B2P14415 290 aaPredicted RBP16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 ZNF763Q0D2J5 394 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 ESX1Q8N693 406 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 GPR22Q99680 433 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 CCM2Q9BSQ5 444 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 SLC17A6Q9P2U8 582 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 LRRC32Q14392 662 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 WDSUB1Q8N9V3 476 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 OR7G2Q8NG99 324 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 NTAN1Q96AB6 310 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 MTFR1LQ9H019 292 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 OR6C6A6NF89 314 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 CRISP1P54107 249 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 ARHGAP12Q8IWW6 846 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 MARVELD2Q8N4S9 558 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 ACDQ96AP0 544 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 MROQ9BYG7 248 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 VILLO15195 856 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 GNRHRP30968 328 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 FTMTQ8N4E7 242 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 NELL2Q99435 816 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 HMX3A6NHT5 357 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 FAAHO00519 579 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 UQCRC2P22695 453 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 RGS6P49758 472 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 LCHNA4D1U4 455 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 DFNA5O60443 496 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 HOXB9P17482 250 aaPredicted RBP16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 CREB5Q02930 508 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 ARL11Q969Q4 196 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 LRFN1Q9P244 771 aa16.29■□□□□ 0.2
SMCHD1-201ENST00000320876 SMIM30A4D0T7 59 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 HAS3O00219 553 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 MANBAO00462 879 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 CRYZL1O95825 349 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 GK2Q14410 553 aaPredicted RBP16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 PDSS1Q5T2R2 415 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 GSG1LQ6UXU4 331 aa16.28■□□□□ 0.2
SMCHD1-201ENST00000320876 FGFBP2Q9BYJ0 223 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms