RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 KRT34O76011 436 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 SEMA3DO95025 777 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 PRPH2P23942 346 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 HNRNPH2P55795 449 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 SHC2P98077 582 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 ZNF763Q0D2J5 394 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 CLPPQ16740 277 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 MUM1Q2TAK8 710 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 C18orf63Q68DL7 685 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 OGFOD2Q6N063 350 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 PAGE2Q7Z2X7 111 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 PRSS58Q8IYP2 241 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 TMEM132CQ8N3T6 1108 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 CSF3RQ99062 836 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 ULBP3Q9BZM4 244 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 ACTL8Q9H568 366 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 ACTR5Q9H9F9 607 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 ATG4BQ9Y4P1 393 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 GPR45Q9Y5Y3 372 aa14.59□□□□□ -0.07
PDLIM5-202ENST00000318007 A0A0A6YYD5 115 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 FAM227AF5H4B4 570 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 GALR3O60755 368 aaPredicted RBP14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 FAM58BPP0C7Q3 252 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 IDO1P14902 403 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 MTTPP55157 894 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 TGM3Q08188 693 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 MAD2L1Q13257 205 aaPredicted RBP14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 RUNX2Q13950 521 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 HERC3Q15034 1050 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 NDUFA9Q16795 377 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 AGKQ53H12 422 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 SHISA6Q6ZSJ9 500 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 SPATA19Q7Z5L4 167 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 MIER2Q8N344 545 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 ARHGEF39Q8N4T4 335 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 C16orf78Q8WTQ4 265 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 PEX11GQ96HA9 241 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 ZNF285Q96NJ3 590 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 TBCDQ9BTW9 1192 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 CHRNA10Q9GZZ6 450 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 AKIRIN1Q9H9L7 192 aaPredicted RBP14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 DLL3Q9NYJ7 618 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 TMED5Q9Y3A6 229 aa14.58□□□□□ -0.07
PDLIM5-202ENST00000318007 NR5A2O00482 541 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 TXNDC9O14530 226 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 PLD2O14939 933 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 B3GALT2O43825 422 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 JRKO75564 520 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 DCTN3O75935 186 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 KIAA0754O94854 1291 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 IL12AP29459 219 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 PTGER1P34995 402 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 CPA2P48052 419 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 C2orf80Q0P641 193 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 PGS1Q32NB8 556 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 CLNKQ7Z7G1 428 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 TREML1Q86YW5 311 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 SRFBP1Q8NEF9 429 aaKnown RBP14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 OR7A2PQ8NGA2 310 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 PROKR1Q8TCW9 393 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 COL26A1Q96A83 441 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 VPS33AQ96AX1 596 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 DPY30Q9C005 99 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 DDX31Q9H8H2 851 aaKnown RBP14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 MCM8Q9UJA3 840 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 PPT2Q9UMR5 302 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 SPTBN4Q9H254 2564 aa14.58□□□□□ -0.08
PDLIM5-202ENST00000318007 PSMD12O00232 456 aaPredicted RBP14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 CCDC22O60826 627 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 SMIM10L1P0DMW3 83 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 SPINK2P20155 84 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 MAPK1P28482 360 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 DGKQP52824 942 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 LIM2P55344 173 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 NDUFAF5Q5TEU4 345 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 MFSD4BQ5TF39 518 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 FAM69BQ5VUD6 431 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 TLDC1Q6P9B6 456 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 FAM199XQ6PEV8 388 aaPredicted RBP14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 SMIM10Q96HG1 83 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 SLC22A7Q9Y694 548 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 KNTC1P50748 2209 aa14.57□□□□□ -0.08
PDLIM5-202ENST00000318007 FITM1A5D6W6 292 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 SLC22A3O75751 556 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 CBX6O95503 412 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 GPX3P22352 226 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 AVPR1BP47901 424 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 ID2Q02363 134 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 SQLEQ14534 574 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 FAM214AQ32MH5 1076 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 FAM174BQ3ZCQ3 159 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 TIGD2Q4W5G0 525 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 ARHGAP40Q5TG30 622 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 GALNT18Q6P9A2 607 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 TMEM151BQ8IW70 566 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 OR4N5Q8IXE1 308 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 TM4SF18Q96CE8 201 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 QRFPRQ96P65 431 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 SERINC2Q96SA4 455 aa14.56□□□□□ -0.08
PDLIM5-202ENST00000318007 MIEF1Q9NQG6 463 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms