RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 SHQ1Q6PI26 577 aaKnown RBP7.25□□□□□ -1.25
CDHR3-201ENST00000317716 MACC1Q6ZN28 852 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 C10orf53Q8N6V4 93 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 SAMD12Q8N8I0 201 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 OR10H4Q8NGA5 316 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 CEP76Q8TAP6 659 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 ST8SIA2Q92186 375 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 BADQ92934 168 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 UBXN10Q96LJ8 280 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 SLC2A13Q96QE2 648 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 BBS4Q96RK4 519 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 OR51B5Q9H339 312 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 TREX1Q9NSU2 369 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 PFDN2Q9UHV9 154 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 ENOPH1Q9UHY7 261 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 STOML2Q9UJZ1 356 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 POFUT2Q9Y2G5 429 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 TET1Q8NFU7 2136 aa7.25□□□□□ -1.25
CDHR3-201ENST00000317716 TTC28Q96AY4 2481 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ZNF487B1APH4 448 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ADAMTS4O75173 837 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ALX3O95076 343 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 FGF4P08620 206 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 PRPS2P11908 318 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 JUNBP17275 347 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-201ENST00000317716 DNASE1P24855 282 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 CXCR2P25025 360 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 HOXA11P31270 313 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-201ENST00000317716 PTGER3P43115 390 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 HCAR3P49019 387 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 STARP49675 285 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 VSX2P58304 361 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-201ENST00000317716 HEPACAMQ14CZ8 416 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 CHRNA6Q15825 494 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 DUOXA1Q1HG43 343 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 FBXO43Q4G163 708 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 MS4A13Q5J8X5 152 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 SLC35F1Q5T1Q4 408 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 RNF130Q86XS8 419 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 VWA5B2Q8N398 1253 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 MFSD4AQ8N468 514 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ZMIZ2Q8NF64 920 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 UFD1Q92890 307 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 SPATA9Q9BWV2 254 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ZNF385DQ9H6B1 395 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 HCN3Q9P1Z3 774 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 HCSTQ9UBK5 93 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 MLXQ9UH92 298 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 PTPRFP10586 1907 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 F5P12259 2224 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 TARM1B6A8C7 271 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ATP6V1G2-DDX39BF2Z307 99 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 PIRO00625 290 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ARHGAP33O14559 1287 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 PAPSS2O95340 614 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-201ENST00000317716 GNRH1P01148 92 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 MTHFD2P13995 350 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 CRISP3P54108 245 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 SLC35A2P78381 396 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 IL10RBQ08334 325 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 IRF5Q13568 498 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ZNF791Q3KP31 576 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-201ENST00000317716 PKDCCQ504Y2 493 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 LHX8Q68G74 356 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 IQCF2Q8IXL9 164 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 OR10T2Q8NGX3 314 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 AUTS2Q8WXX7 1259 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 MYO19Q96H55 970 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 MAGEB10Q96LZ2 347 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-201ENST00000317716 FERD3LQ96RJ6 166 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 TMEM121BQ9BXQ6 578 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-201ENST00000317716 KATNBL1Q9H079 304 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 NUDT15Q9NV35 164 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 OSER1Q9NX31 292 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 SAGE1Q9NXZ1 904 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 TRPM5Q9NZQ8 1165 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 CLEC2DQ9UHP7 191 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 MUTYHQ9UIF7 546 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 POLHQ9Y253 713 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 DERAQ9Y315 318 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 SMIM35A0A1B0GVV1 85 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 TCRBV5S2A0A599 114 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 GRXCR1A8MXD5 290 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 PIP5K1CO60331 668 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ENTPD6O75354 484 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 GATBO75879 557 aaKnown RBP7.24□□□□□ -1.25
CDHR3-201ENST00000317716 CATP04040 527 aaKnown RBP7.24□□□□□ -1.25
CDHR3-201ENST00000317716 HTR1AP08908 422 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ZNF806P0C7X5 589 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 CKBP12277 381 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ACPPP15309 386 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 ATF6P18850 670 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 TGFBR2P37173 567 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 HTR3AP46098 478 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 PRMT2P55345 433 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 HOXC5Q00444 222 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 CDK6Q00534 326 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 OR2G6Q5TZ20 316 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 FRG2Q64ET8 278 aa7.24□□□□□ -1.25
CDHR3-201ENST00000317716 GTF2IRD2BQ6EKJ0 949 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms