RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MAP6Q96JE9 813 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 RDH12Q96NR8 316 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 SLIRPQ9GZT3 109 aaKnown RBP12.51□□□□□ -0.41
CPNE1-201ENST00000317677 DPEP2Q9H4A9 486 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 C11orf16Q9NQ32 467 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 ASIC5Q9NY37 505 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 LIMD1Q9UGP4 676 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 NUP50Q9UKX7 468 aa12.51□□□□□ -0.41
CPNE1-201ENST00000317677 ZNF99A8MXY4 864 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-201ENST00000317677 NARSO43776 548 aaKnown RBP12.5□□□□□ -0.41
CPNE1-201ENST00000317677 RNGTTO60942 597 aaKnown RBP12.5□□□□□ -0.41
CPNE1-201ENST00000317677 UMPSP11172 480 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PRPH2P23942 346 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 GP2P55259 537 aaKnown RBP12.5□□□□□ -0.41
CPNE1-201ENST00000317677 TBPL1P62380 186 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 IRF8Q02556 426 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PCDH1Q08174 1060 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 IMPG1Q17R60 797 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 FRG2Q64ET8 278 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 UBQLNLQ8IYU4 475 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 KRTCAP2Q8N6L1 136 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PSMA8Q8TAA3 256 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 APIPQ96GX9 242 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 FOPNLQ96NB1 174 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 FRG2BQ96QU4 278 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 HOPXQ9BPY8 73 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-201ENST00000317677 ING2Q9H160 280 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 MMP27Q9H306 513 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 FZD3Q9NPG1 666 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 C1orf109Q9NX04 203 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PLAGL1Q9UM63 463 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PCDHA9Q9Y5H5 950 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PCM1Q15154 2024 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 SERTM1A2A2V5 107 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 CCDC154A6NI56 674 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PDZK1P1A8MUH7 402 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 NPIPB8E9PQR5 432 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 B4GAT1O43505 415 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 SEC22BO75396 215 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 ASGR2P07307 311 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 HTR1AP08908 422 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 BCKDHAP12694 445 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 TACR1P25103 407 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 TEAD1P28347 426 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 MAPK9P45984 424 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PRIM2P49643 509 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 ZXDAP98168 799 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PRKG2Q13237 762 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 STARD3Q14849 445 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 DPY19L1Q2PZI1 675 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 XKR6Q5GH73 641 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 C6orf141Q5SZD1 244 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 LIPJQ5W064 366 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 CCBE1Q6UXH8 406 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PDZD3Q86UT5 571 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 LRRTM4Q86VH4 590 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 AMZ2Q86W34 360 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 CCDC103Q8IW40 242 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 PSD4Q8NDX1 1056 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 OR5AR1Q8NGP9 310 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 OR9A1PQ8NGU1 263 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 CLHC1Q8NHS4 586 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 GANCQ8TET4 914 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 NEIL2Q969S2 332 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 TMEM125Q96AQ2 219 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 AURKBQ96GD4 344 aaPredicted RBP12.5□□□□□ -0.41
CPNE1-201ENST00000317677 ST6GAL2Q96JF0 529 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 IL17FQ96PD4 163 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 SGPP1Q9BX95 441 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 ELOVL6Q9H5J4 265 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 WDR26Q9H7D7 661 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 ABCB10Q9NRK6 738 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 GIMAP4Q9NUV9 329 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 TMEM45AQ9NWC5 275 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 SNX6Q9UNH7 406 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 AURKCQ9UQB9 309 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 GRIP1Q9Y3R0 1128 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 TECTAO75443 2155 aa12.5□□□□□ -0.41
CPNE1-201ENST00000317677 FAM149AA5PLN7 773 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 UGDHO60701 494 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 DNTTP04053 509 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 SPNP16150 400 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 NPPBP16860 134 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 MAT2AP31153 395 aaKnown RBP12.49□□□□□ -0.41
CPNE1-201ENST00000317677 RPS21P63220 83 aaKnown RBP12.49□□□□□ -0.41
CPNE1-201ENST00000317677 BNC1Q01954 994 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 ZNF45Q02386 682 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 TAP2Q03519 686 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 NFYCQ13952 458 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 RABL3Q5HYI8 236 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 CATSPEREQ5SY80 951 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 METRNLQ641Q3 311 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 GRHL2Q6ISB3 625 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 DLEU7Q6UYE1 221 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 SLCO4C1Q6ZQN7 724 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 FAM110BQ8TC76 370 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 MAGEE2Q8TD90 523 aaPredicted RBP12.49□□□□□ -0.41
CPNE1-201ENST00000317677 PROX1Q92786 737 aa12.49□□□□□ -0.41
CPNE1-201ENST00000317677 YIPF6Q96EC8 236 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms