RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 KRT71Q3SY84 523 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PRR30Q53SZ7 412 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-201ENST00000311943 KHDRBS2Q5VWX1 349 aaKnown RBP11.33□□□□□ -0.6
SCFD1-201ENST00000311943 ZYG11AQ6WRX3 759 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 ANKRD37Q7Z713 158 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 GALNT16Q8N428 558 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 MREGQ8N565 214 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 ACOT4Q8N9L9 421 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 CCDC63Q8NA47 563 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 C9orf43Q8TAL5 461 aaPredicted RBP11.33□□□□□ -0.6
SCFD1-201ENST00000311943 TCP10LQ8TDR4 215 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 ACMSDQ8TDX5 336 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 GAL3ST3Q96A11 431 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 THOC3Q96J01 351 aaKnown RBP11.33□□□□□ -0.6
SCFD1-201ENST00000311943 PTCHD1Q96NR3 888 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 SLC25A23Q9BV35 468 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 SEMA3GQ9NS98 782 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 GPR83Q9NYM4 423 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 DCDC2Q9UHG0 476 aa11.33□□□□□ -0.6
SCFD1-201ENST00000311943 CYR61O00622 381 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 PEX12O00623 359 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 PRPF4O43172 522 aaKnown RBP eCLIP11.32□□□□□ -0.6
SCFD1-201ENST00000311943 ITGAMP11215 1152 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 ACPPP15309 386 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 IMPDH1P20839 514 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 ATP5A1P25705 553 aaKnown RBP11.32□□□□□ -0.6
SCFD1-201ENST00000311943 HNRNPH2P55795 449 aaKnown RBP11.32□□□□□ -0.6
SCFD1-201ENST00000311943 PCDH1Q08174 1060 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 NSDHLQ15738 373 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 PAGE2BQ5JRK9 111 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 BEND6Q5SZJ8 279 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-201ENST00000311943 CEP85LQ5SZL2 805 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 DEPDC1Q5TB30 811 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 LIPJQ5W064 366 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 TMEM205Q6UW68 189 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 C16orf47Q6ZP98 133 aaPredicted RBP11.32□□□□□ -0.6
SCFD1-201ENST00000311943 DGAT2L6Q6ZPD8 337 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 LINC00696Q6ZRV3 163 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 ASB18Q6ZVZ8 466 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 EXOC3L1Q86VI1 746 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 TBC1D19Q8N5T2 526 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 PKNOX2Q96KN3 472 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 NTMT1Q9BV86 223 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 LIN28AQ9H9Z2 209 aaKnown RBP11.32□□□□□ -0.6
SCFD1-201ENST00000311943 PLA2G3Q9NZ20 509 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 LGALS13Q9UHV8 139 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 ATG4BQ9Y4P1 393 aa11.32□□□□□ -0.6
SCFD1-201ENST00000311943 TNPO3Q9Y5L0 923 aaKnown RBP11.32□□□□□ -0.6
SCFD1-201ENST00000311943 TMEM233B4DJY2 109 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 H0YIV9 168 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 CEACAM4O75871 244 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 CHRNGP07510 517 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 CPA3P15088 417 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 ALDH3A1P30838 453 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 MLLT10P55197 1068 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 STXBP1P61764 594 aaKnown RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 HMGCS1Q01581 520 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 HIST2H2ACQ16777 129 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 TUBB8Q3ZCM7 444 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 SFT2D3Q587I9 215 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 CLEC6AQ6EIG7 209 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 HIST2H2AA3Q6FI13 130 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 TRIM40Q6P9F5 258 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 MED25Q71SY5 747 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 ZNF321PQ8N8H1 164 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 TMEM102Q8N9M5 508 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 CATSPER1Q8NEC5 780 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 AGR3Q8TD06 166 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 BRIX1Q8TDN6 353 aaKnown RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 PPP4R1Q8TF05 950 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 FAR2Q96K12 515 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 C1QTNF3Q9BXJ4 246 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 C5AR2Q9P296 337 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 PTGFRNQ9P2B2 879 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 NXT1Q9UKK6 140 aaKnown RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 DAPP1Q9UN19 280 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 PLLPQ9Y342 182 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 FIS1Q9Y3D6 152 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 SPTA1P02549 2419 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 NSG1A0A0A6YYJ2 146 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 WDR91A4D1P6 747 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 MYL2P10916 166 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 HIST1H1TP22492 207 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 BSGP35613 385 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 SLAMF1Q13291 335 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 RASA2Q15283 850 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 ZNF750Q32MQ0 723 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 FRG2Q64ET8 278 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 TTC19Q6DKK2 380 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 PRICKLE2Q7Z3G6 844 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 RBMXL3Q8N7X1 1067 aaKnown RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 CLEC1AQ8NC01 280 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 APOPT1Q96IL0 206 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 IMMP1LQ96LU5 166 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 FRG2BQ96QU4 278 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 NPAS2Q99743 824 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 GATA5Q9BWX5 397 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 MID1IP1Q9NPA3 183 aa11.31□□□□□ -0.6
SCFD1-201ENST00000311943 TEX10Q9NXF1 929 aaPredicted RBP11.31□□□□□ -0.6
SCFD1-201ENST00000311943 ANKRD10Q9NXR5 420 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms