RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 BBS7Q8IWZ6 715 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 PGBD3Q8N328 593 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ZNF366Q8N895 744 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 KLHDC9Q8NEP7 349 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 STARD7Q9NQZ5 370 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 EYSQ5T1H1 3165 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 USP34Q70CQ2 3546 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 HYKKA2RU49 373 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 TOR1AO14656 332 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 CLDN8P56748 225 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 CLDN20P56880 219 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 IL18Q14116 193 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 EXOC3L2Q2M3D2 409 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 KLHL12Q53G59 568 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ARTNQ5T4W7 220 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 PDZD3Q86UT5 571 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 DENND1CQ8IV53 801 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 CDC26Q8NHZ8 85 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 FBXW5Q969U6 566 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 AP2M1Q96CW1 435 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 GPR137Q96N19 417 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 PPA2Q9H2U2 334 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ANKRA2Q9H9E1 313 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 ELOVL2Q9NXB9 296 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 NDUFAF4Q9P032 175 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 AUP1Q9Y679 476 aa17.31■□□□□ 0.36
SPSB4-201ENST00000310546 TET1Q8NFU7 2136 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 NUPL2O15504 423 aaKnown RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 PQBP1O60828 265 aaKnown RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 HOXD4P09016 255 aaPredicted RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 SSTR2P30874 369 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 SRP54P61011 504 aaKnown RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 ZNF57Q68EA5 555 aaPredicted RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 PAQR6Q6TCH4 344 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 SBSNQ6UWP8 590 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 TMIGD1Q6UXZ0 262 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 UBE2Q1Q7Z7E8 422 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 RTN4RL1Q86UN2 441 aaPredicted RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 ZNF280BQ86YH2 543 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 DUSP18Q8NEJ0 188 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 DEFB118Q96PH6 123 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 ACPTQ9BZG2 426 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 POLR1EQ9GZS1 481 aaKnown RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 TXNL4BQ9NX01 149 aaKnown RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 MYO7AQ13402 2215 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 ADAMDEC1O15204 470 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 IGLV3-25P01717 112 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 ANXA8P13928 327 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 HOXB9P17482 250 aaPredicted RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 KIR3DL1P43629 444 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 CRYBA2P53672 197 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 CASP9P55211 416 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 FCN2Q15485 313 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 GRK1Q15835 563 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 PUS10Q3MIT2 529 aaKnown RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 TIGD5Q53EQ6 642 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 SDHAF4Q5VUM1 108 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 TMEM81Q6P7N7 255 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 GDPGP1Q6ZNW5 385 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 TMEM145Q8NBT3 493 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 MARVELD1Q9BSK0 173 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 WACQ9BTA9 647 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 B3GAT2Q9NPZ5 323 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 NLE1Q9NVX2 485 aaPredicted RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 SAGE1Q9NXZ1 904 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 WWOXQ9NZC7 414 aa17.3■□□□□ 0.36
SPSB4-201ENST00000310546 CNOT2Q9NZN8 540 aaKnown RBP17.3■□□□□ 0.36
SPSB4-201ENST00000310546 MANBAO00462 879 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 LZTS3O60299 673 aaPredicted RBP17.29■□□□□ 0.36
SPSB4-201ENST00000310546 ENTPD6O75354 484 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 RAF1P04049 648 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 CNR2P34972 360 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 FEN1P39748 380 aaKnown RBP17.29■□□□□ 0.36
SPSB4-201ENST00000310546 MAP2K6P52564 334 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 ZNF235Q14590 738 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 LHX8Q68G74 356 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 CNIH2Q6PI25 160 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 TRIM46Q7Z4K8 759 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 PIH1D2Q8WWB5 315 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 MSLNLQ96KJ4 702 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 C1QTNF6Q9BXI9 259 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 ATP6V1HQ9UI12 483 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 MAGEB17A8MXT2 336 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 TAPBPO15533 448 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 HBQ1P09105 142 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 CKBP12277 381 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 GRK4P32298 578 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 HMGCLP35914 325 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 CCL23P55773 120 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 LRRC32Q14392 662 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 LIPIQ6XZB0 460 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 TSEN54Q7Z6J9 526 aaKnown RBP17.29■□□□□ 0.36
SPSB4-201ENST00000310546 CIR1Q86X95 450 aaPredicted RBP17.29■□□□□ 0.36
SPSB4-201ENST00000310546 SYT14Q8NB59 555 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 MYLPFQ96A32 169 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 SCLYQ96I15 445 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 HMX1Q9NP08 348 aaPredicted RBP17.29■□□□□ 0.36
SPSB4-201ENST00000310546 C11orf16Q9NQ32 467 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 RDH8Q9NYR8 311 aa17.29■□□□□ 0.36
SPSB4-201ENST00000310546 DNAJC27Q9NZQ0 273 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms