RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 STT3BQ8TCJ2 826 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 TWIST2Q8WVJ9 160 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 ZNF75CPQ92670 426 aaPredicted RBP16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 NAF1Q96HR8 494 aaKnown RBP16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 YIPF2Q9BWQ6 316 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 ACPTQ9BZG2 426 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 SHCBP1LQ9BZQ2 653 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 ACTL8Q9H568 366 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 SEMA3GQ9NS98 782 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 FARSBQ9NSD9 589 aaKnown RBP16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 RIC8BQ9NVN3 520 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 SIRT5Q9NXA8 310 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 WBP11Q9Y2W2 641 aaKnown RBP16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 TMED5Q9Y3A6 229 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 SEC16AO15027 2179 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 CHST10O43529 356 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 CREG1O75629 220 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 KLF7O75840 302 aaPredicted RBP16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 BMP10O95393 424 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 SPTBP11277 2137 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 PCSK2P16519 638 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 TMPRSS3P57727 454 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 RAB38P57729 211 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 TRA2BP62995 288 aaKnown RBP16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 TLE3Q04726 772 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 SSPNQ14714 243 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 TCHHL1Q5QJ38 904 aaPredicted RBP16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 GALNT18Q6P9A2 607 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 RGS9BPQ6ZS82 235 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 PRSS41Q7RTY9 318 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 RAB43Q86YS6 212 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 LRRC34Q8IZ02 419 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 STARD8Q92502 1023 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 MAGEB18Q96M61 343 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 DCBLD2Q96PD2 775 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 AKIRIN1Q9H9L7 192 aaPredicted RBP16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 PRDM9Q9NQV7 894 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 CTSFQ9UBX1 484 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 VTI1BQ9UEU0 232 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 ZDHHC2Q9UIJ5 367 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 DAPP1Q9UN19 280 aa16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 PTRH2Q9Y3E5 179 aaKnown RBP16.92■□□□□ 0.3
SSSCA1-201ENST00000309328 DMXL2Q8TDJ6 3036 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 ACACBO00763 2458 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 IGF2RP11717 2491 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 ZNF860A6NHJ4 632 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 CLDN4O14493 209 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 ITM2AO43736 263 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 VPS4BO75351 444 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 MYO1DO94832 1006 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 ETHE1O95571 254 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 FHP07954 510 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 CERS1P27544 350 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 PPP2R1BP30154 601 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 ARRB2P32121 409 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 BSGP35613 385 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 BUD31P41223 144 aaPredicted RBP16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 HTR6P50406 440 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 TBL3Q12788 808 aaKnown RBP16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 UGT3A2Q3SY77 523 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 LCN10Q6JVE6 187 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 CCDC81Q6ZN84 652 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 CRLF3Q8IUI8 442 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 ZC3H7AQ8IWR0 971 aaKnown RBP16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 PARP9Q8IXQ6 854 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 DDIASQ8IXT1 998 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 ZNF595Q8IYB9 648 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 CA13Q8N1Q1 262 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 ZNF781Q8N8C0 355 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 CHTF18Q8WVB6 975 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 CKAP2Q8WWK9 683 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 PPP3R2Q96LZ3 170 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 C7orf26Q96N11 449 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 SORT1Q99523 831 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 SPSB2Q99619 263 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 TNFRSF12AQ9NP84 129 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 WDR70Q9NW82 654 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 HCN3Q9P1Z3 774 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 MCM8Q9UJA3 840 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 MMACHCQ9Y4U1 282 aa16.91■□□□□ 0.3
SSSCA1-201ENST00000309328 A0A0A6YYD5 115 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 TRPC5OSA6NMA1 111 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 C4orf51C9J302 202 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 SAP18O00422 153 aaKnown RBP16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 ACPPP15309 386 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 LIM2P55344 173 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 OCRLQ01968 901 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 SLAMF1Q13291 335 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 BIKQ13323 160 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 UGT8Q16880 541 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 SMU1Q2TAY7 513 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 SPDYAQ5MJ70 313 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 ZNF793Q6ZN11 406 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 COMMD6Q7Z4G1 85 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 VASH2Q86V25 355 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 GPR180Q86V85 440 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 RNF175Q8N4F7 328 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 METTL21AQ8WXB1 218 aa16.9■□□□□ 0.3
SSSCA1-201ENST00000309328 THAP4Q8WY91 577 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms