RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PIWIL4Q7Z3Z4 852 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 RAB44Q7Z6P3 723 aaPredicted RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 TDRPQ86YL5 185 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 TAGAPQ8N103 731 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 Q8N9G6 341 aaPredicted RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 OR52E1Q8NGJ3 308 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 OR10G6Q8NH81 332 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 MAGEC3Q8TD91 643 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 SKA2Q8WVK7 121 aaPredicted RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 DLG3Q92796 817 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 PPP1R14AQ96A00 147 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 RAD51AP1Q96B01 352 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 LINGO1Q96FE5 620 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 CGREF1Q99674 301 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 DPYSL5Q9BPU6 564 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 HAUS8Q9BT25 410 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 SLC12A9Q9BXP2 914 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 DERL2Q9GZP9 239 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 NUDT15Q9NV35 164 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 EURLQ9NYK6 297 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 EPHA6Q9UF33 1036 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 PAIP2BQ9ULR5 123 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 RUVBL1Q9Y265 456 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 UQCRHLA0A096LP55 91 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 OR5K3A6NET4 321 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 TTLL8A6PVC2 850 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 ARHGEF33A8MVX0 844 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 D6RAR5 112 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 MYO1CO00159 1063 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 PHGDHO43175 533 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 DUX1O43812 170 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 CBR3O75828 277 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 KRT37O76014 449 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 C9P02748 559 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 CATP04040 527 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 C2P06681 752 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 PROS1P07225 676 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 C8GP07360 202 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 UQCRHP07919 91 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 SNRPAP09012 282 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 ALOX5P09917 674 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 CCDC166P0CW27 439 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 ERGP11308 486 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 CAPZBP47756 277 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 RAB28P51157 221 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 ZFP36L1Q07352 338 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 CSTF3Q12996 717 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 TRA2AQ13595 282 aaKnown RBP eCLIP7.89□□□□□ -1.15
CHD6-201ENST00000309279 SPIDRQ14159 915 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 RPS6KA2Q15349 733 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 NKAIN2Q5VXU1 208 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 TMEM71Q6P5X7 295 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 TTC23LQ6PF05 361 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 KLHL35Q6PF15 583 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 DEGS2Q6QHC5 323 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 PET117Q6UWS5 81 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 TIFABQ6ZNK6 161 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 TMPRSS9Q7Z410 1059 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 CMC1Q7Z7K0 106 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 AMIGO1Q86WK6 493 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 TMPRSS12Q86WS5 348 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 KIF18BQ86Y91 864 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 IQCKQ8N0W5 287 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 MIER2Q8N344 545 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 DCBLD1Q8N8Z6 715 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 KDF1Q8NAX2 398 aaPredicted RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 OR4D9Q8NGE8 314 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 CFAP61Q8NHU2 1237 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 HMGCLL1Q8TB92 370 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 MZB1Q8WU39 189 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 LCN9Q8WX39 176 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 KLHL6Q8WZ60 621 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 MTBPQ96DY7 904 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 GFM1Q96RP9 751 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 DMRTA2Q96SC8 542 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 KCNJ15Q99712 375 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 SRMSQ9H3Y6 488 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 PARVBQ9HBI1 364 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 TMEM184CQ9NVA4 438 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 PSMC3IPQ9P2W1 217 aaPredicted RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 ADAMTS6Q9UKP5 1117 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 ICKQ9UPZ9 632 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 RUVBL2Q9Y230 463 aaKnown RBP7.89□□□□□ -1.15
CHD6-201ENST00000309279 PCDHB11Q9Y5F2 797 aa7.89□□□□□ -1.15
CHD6-201ENST00000309279 SNRNP200O75643 2136 aaKnown RBP7.88□□□□□ -1.15
CHD6-201ENST00000309279 KIF26BQ2KJY2 2108 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 A0A087X1B8 175 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 RASGRF2O14827 1237 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 HNRNPRO43390 633 aaKnown RBP7.88□□□□□ -1.15
CHD6-201ENST00000309279 CDH16O75309 829 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 MT-CO3P00414 261 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 APEHP13798 732 aaKnown RBP7.88□□□□□ -1.15
CHD6-201ENST00000309279 CD1DP15813 335 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 AMD1P17707 334 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 IL32P24001 234 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 TYK2P29597 1187 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 PKLRP30613 574 aa7.88□□□□□ -1.15
CHD6-201ENST00000309279 CSF2RBP32927 897 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms