RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 GTPBP2Q9BX10 602 aaKnown RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 PMF1-BGLAPU3KQ54 211 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 TCRBV21S2A2A0A5A6 115 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 OR5K4A6NMS3 321 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 J3QLW9 94 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 TGM5O43548 720 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 AHSA1O95433 338 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 ZNF19P17023 458 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 OR1E2P47887 323 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 DSG2Q14126 1118 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 OR4D1Q15615 310 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 PGBD2Q6P3X8 592 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 C15orf40Q8WUR7 153 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 DNAJA4Q8WW22 397 aaPredicted RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 MCCC2Q9HCC0 563 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 CCM2LQ9NUG4 571 aaPredicted RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 PLGP00747 810 aaPredicted RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 FUT4P22083 530 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 FCHO2Q0JRZ9 810 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 ZNF267Q14586 743 aaPredicted RBP15.34■□□□□ 0.05
USP42-201ENST00000306177 FAM214AQ32MH5 1076 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 MARCH8Q5T0T0 291 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 OR2L3Q8NG85 312 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 B3GNT4Q9C0J1 378 aa15.34■□□□□ 0.05
USP42-201ENST00000306177 A0A1W2PQU0 124 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 A0A1W2PRG6 482 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 H0YAE9 185 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 ZNF208O43345 1280 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 OR3A3P47888 321 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 OR3A2P47893 321 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 SLC6A9P48067 706 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 VEGFBP49765 207 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 SLC3A1Q07837 685 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 DOC2AQ14183 400 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 TUBA3EQ6PEY2 450 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 HACD2Q6Y1H2 254 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 DEFB119Q8N690 84 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 SUN3Q8TAQ9 357 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 SETD6Q8TBK2 473 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 DOHHQ9BU89 302 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 TMEM9Q9P0T7 183 aa15.33■□□□□ 0.05
USP42-201ENST00000306177 BPIP17213 487 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 CD72P21854 359 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 SPINT3P49223 89 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 DCDC1P59894 354 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 SMU1Q2TAY7 513 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 EMC10Q5UCC4 262 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 KANK2Q63ZY3 851 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 SHQ1Q6PI26 577 aaKnown RBP15.33■□□□□ 0.04
USP42-201ENST00000306177 RANBP10Q6VN20 620 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 MINDY1Q8N5J2 469 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 METTL7AQ9H8H3 244 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 PGGT1BP53609 377 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 VSX2P58304 361 aaPredicted RBP15.33■□□□□ 0.04
USP42-201ENST00000306177 MEDAGQ5VYS4 303 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 BLOC1S3Q6QNY0 202 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 TCEANCQ8N8B7 351 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 OR8D2Q9GZM6 311 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 BRD7Q9NPI1 651 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 PRODH2Q9UF12 536 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 CYP8B1Q9UNU6 501 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 RNF6Q9Y252 685 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 PTGDR2Q9Y5Y4 395 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 ZCWPW2A0A1B0GU75 182 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 BLOC1S5-TXNDC5H3BN57 136 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 ZNF821O75541 412 aaPredicted RBP15.33■□□□□ 0.04
USP42-201ENST00000306177 C6P13671 934 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 HK1P19367 917 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 CARM1Q86X55 608 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 OR8H1Q8NGG4 311 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.33■□□□□ 0.044e-22■■■■□ 26.1
USP42-201ENST00000306177 L3HYPDHQ96EM0 354 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 TTYH1Q9H313 450 aaPredicted RBP15.33■□□□□ 0.04
USP42-201ENST00000306177 EHD1Q9H4M9 534 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 PRTFDC1Q9NRG1 225 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 DNAJC27Q9NZQ0 273 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 GRHPRQ9UBQ7 328 aa15.33■□□□□ 0.04
USP42-201ENST00000306177 MYH7P12883 1935 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 OR12D1P0DN82 309 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 CD70P32970 193 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 CD68P34810 354 aaPredicted RBP15.32■□□□□ 0.04
USP42-201ENST00000306177 OR2B6P58173 313 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 TAS2R43P59537 309 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 TBC1D25Q3MII6 688 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 ZNF550Q7Z398 422 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 SORCS1Q8WY21 1168 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 HDAC2Q92769 488 aaKnown RBP15.32■□□□□ 0.04
USP42-201ENST00000306177 MOCOSQ96EN8 888 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 ZDHHC12Q96GR4 267 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 SEC61A2Q9H9S3 476 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 GRXCR1A8MXD5 290 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 ARMC10Q8N2F6 343 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 FAM129BQ96TA1 746 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 SYT11Q9BT88 431 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 EXOSC1Q9Y3B2 195 aaKnown RBP15.32■□□□□ 0.04
USP42-201ENST00000306177 C1orf226A1L170 272 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 SNNO75324 88 aaPredicted RBP15.32■□□□□ 0.04
USP42-201ENST00000306177 HPRP00739 348 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 SNTA1Q13424 505 aa15.32■□□□□ 0.04
USP42-201ENST00000306177 FLYWCH1Q4VC44 716 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms