RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 C18orf21Q32NC0 220 aaPredicted RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 IFI44LQ53G44 452 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF311Q5JNZ3 666 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 DEPDC1Q5TB30 811 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 CDC73Q6P1J9 531 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 GALNT7Q86SF2 657 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 PGAM4Q8N0Y7 254 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 C19orf47Q8N9M1 422 aaKnown RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 OR2L8Q8NGY9 312 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 PIGXQ8TBF5 258 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 ASB15Q8WXK1 588 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 CCDC74AQ96AQ1 378 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 NSMCE3Q96MG7 304 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 S100A13Q99584 98 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 EBF4Q9BQW3 602 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 TMEM79Q9BSE2 394 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 G6PC3Q9BUM1 346 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 ARL8BQ9NVJ2 186 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 TLCD2A6NGC4 264 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 GP1BBP13224 206 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 MSX2P35548 267 aaPredicted RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 GSTM5P46439 218 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 DPTQ07507 201 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 CTC1Q2NKJ3 1217 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 HLA-BQ31612 363 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 SPANXN4Q5MJ08 99 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 C6orf136Q5SQH8 315 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 PIP5KL1Q5T9C9 394 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 AGBL4Q5VU57 503 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 RNF168Q8IYW5 571 aaPredicted RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 SLC5A8Q8N695 610 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 ASB11Q8WXH4 323 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 NEIL2Q969S2 332 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 SH3YL1Q96HL8 342 aaPredicted RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 CUTCQ9NTM9 273 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 KCND3Q9UK17 655 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 TTLL8A6PVC2 850 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 A8MVJ9 347 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 K7ESM1 405 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 MYL12BO14950 172 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 SMNDC1O75940 238 aaKnown RBP eCLIP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 OR6B1O95007 311 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF888P0CJ79 500 aaPredicted RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 TCN2P20062 427 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 PRDX6P30041 224 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 ARG2P78540 354 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 PRDX1Q06830 199 aaKnown RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 KPNB1Q14974 876 aaKnown RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 KCTD11Q693B1 232 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 DGLUCYQ7Z3D6 616 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 TMEM151BQ8IW70 566 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 SMYD1Q8NB12 490 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 PDFQ9HBH1 243 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 CTPS2Q9NRF8 586 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 C1GALT1Q9NS00 363 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 HPF1Q9NWY4 346 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 PADI1Q9ULC6 663 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 U3KQV3 271 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 SGK494L7N484 410 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 CASKO14936 926 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 SLC22A2O15244 555 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 YY2O15391 372 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 AKAP8O43823 692 aaKnown RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 UGT2B7P16662 529 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 PRDX3P30048 256 aaKnown RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 GABRA3P34903 492 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 SERPINB10P48595 397 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 BLVRAP53004 296 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 UFM1P61960 85 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 ADGRE1Q14246 886 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 NAIF1Q69YI7 327 aaPredicted RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 SPPL2CQ8IUH8 684 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 OR5P2Q8WZ92 322 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 GAL3ST3Q96A11 431 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 NXPE2Q96DL1 559 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 EPYCQ99645 322 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 PITHD1Q9GZP4 211 aaPredicted RBP8.86□□□□□ -0.99
PTPRE-202ENST00000306042 TPT1P8Q9HAU6 139 aa8.86□□□□□ -0.99
PTPRE-202ENST00000306042 DOCK5Q9H7D0 1870 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 TRBC2A0A5B9 178 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 C4orf47A7E2U8 309 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CXCR6O00574 342 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 TPST2O60704 377 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 TMCC2O75069 709 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 BCAS2O75934 225 aaPredicted RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PRKAR1AP10644 381 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 PSMB5P28074 263 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 CCR10P46092 362 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 YAP1P46937 504 aaKnown RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 MRPS15P82914 257 aaKnown RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 FOXC1Q12948 553 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 TMEM184AQ6ZMB5 413 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ZNF534Q76KX8 674 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 NET1Q7Z628 596 aaPredicted RBP8.85□□□□□ -0.99
PTPRE-202ENST00000306042 TMEM150AQ86TG1 271 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 ZFAND4Q86XD8 727 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 OR2L5Q8NG80 312 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 OR7G3Q8NG95 312 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 Q96MT0 163 aa8.85□□□□□ -0.99
PTPRE-202ENST00000306042 OR52B2Q96RD2 323 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms