RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 BCKDHAP12694 445 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 VMACQ2NL98 169 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 TMED4Q7Z7H5 227 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 PRR11Q96HE9 360 aaPredicted RBP13.43□□□□□ -0.26
PRKCB-201ENST00000303531 DHRS1Q96LJ7 313 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 DOHHQ9BU89 302 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 TAS2R9Q9NYW1 312 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 KLF15Q9UIH9 416 aa13.43□□□□□ -0.26
PRKCB-201ENST00000303531 OR12D1P0DN82 309 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 VAMP1P23763 118 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 MAN2A2P49641 1150 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 RING1Q06587 406 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 ARHGAP40Q5TG30 622 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 PSAPL1Q6NUJ1 521 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 C15orf39Q6ZRI6 1047 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 RASGRP3Q8IV61 690 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 OR51G2Q8NGK0 314 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 OR2L8Q8NGY9 312 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 TMEM5Q9Y2B1 443 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 SLITRK5O94991 958 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 MEDAGQ5VYS4 303 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 CCDC116Q8IYX3 515 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 TUBA1CQ9BQE3 449 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 ADAMTS10Q9H324 1103 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 AURKAO14965 403 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 IL3P08700 152 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 GADD45AP24522 165 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 IST1P53990 364 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 LMAN2Q12907 356 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 SIX1Q15475 284 aaPredicted RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 EXOC3L2Q2M3D2 409 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 C6orf141Q5SZD1 244 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 STEAP4Q687X5 459 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 IRF7Q92985 503 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 RAB6CQ53S08 254 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF367Q7RTV3 350 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 FOXRED2Q8IWF2 684 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 S100A16Q96FQ6 103 aaKnown RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 RAB6CQ9H0N0 254 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 HPRP00739 348 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 MRPL3P09001 348 aaKnown RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 AGXTP21549 392 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF805Q5CZA5 627 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 PRRT3Q5FWE3 981 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 GALNT12Q8IXK2 581 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 OR10T2Q8NGX3 314 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 BBS10Q8TAM1 723 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF431Q8TF32 576 aaPredicted RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 MMP27Q9H306 513 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 ACTL8Q9H568 366 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 XKR8Q9H6D3 395 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 MCCC2Q9HCC0 563 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 ERVK-18Q9QC07 812 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 LAMP5Q9UJQ1 280 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF821O75541 412 aaPredicted RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 CSF2P04141 144 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 GALTP07902 379 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 TYRP1P17643 537 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 GSCP56915 257 aaPredicted RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 DENND1AQ8TEH3 1009 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 SCGB3A2Q96PL1 93 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 FBXO9Q9UK97 447 aaPredicted RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 CDH10Q9Y6N8 788 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 MYH11P35749 1972 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 MYH6P13533 1939 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 L7N2F9 121 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 PLGP00747 810 aaPredicted RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 CSTBP04080 98 aaKnown RBP13.42□□□□□ -0.26
PRKCB-201ENST00000303531 CFIP05156 583 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 C1GALT1C1LP0DN25 315 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 CKMT1AP12532 417 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 GP1BBP13224 206 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 PROZP22891 400 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 TIA1P31483 386 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■□□ 16.9
PRKCB-201ENST00000303531 VAMP2P63027 116 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 MARVELD2Q8N4S9 558 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 IGSF21Q96ID5 467 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 ZNF778Q96MU6 729 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 HPF1Q9NWY4 346 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 PCDHGB6Q9Y5F9 930 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 PCDHGB5Q9Y5G0 923 aa13.42□□□□□ -0.26
PRKCB-201ENST00000303531 SLC16A5O15375 505 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 SCGB1D2O95969 90 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 CD9P21926 228 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 CBLP22681 906 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 MAPK3P27361 379 aaPredicted RBP13.41□□□□□ -0.26
PRKCB-201ENST00000303531 GRM2Q14416 872 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 SEC23BQ15437 767 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 AMIGO3Q86WK7 504 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 OR4K17Q8NGC6 315 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 PIP5K1AQ99755 562 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 NUDT15Q9NV35 164 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 MPC1LP0DKB6 136 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 GRK5P34947 590 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 SLC9B2Q86UD5 537 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 THAP6Q8TBB0 222 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 OR5P2Q8WZ92 322 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 GLYATL1Q969I3 302 aa13.41□□□□□ -0.26
PRKCB-201ENST00000303531 MOAP1Q96BY2 351 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms