RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ANKFN1Q8N957 763 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 MFSD9Q8NBP5 474 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 GOT1L1Q8NHS2 421 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-202ENST00000297979 PATE1Q8WXA2 126 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 BTBD9Q96Q07 612 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 SEPHS2Q99611 448 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 TWSG1Q9GZX9 223 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 PCED1AQ9H1Q7 454 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 CHRDQ9H2X0 955 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 DDX31Q9H8H2 851 aaKnown RBP13.59□□□□□ -0.23
C9orf3-202ENST00000297979 CNOT11Q9UKZ1 510 aaKnown RBP13.59□□□□□ -0.23
C9orf3-202ENST00000297979 PCDHGB4Q9UN71 923 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 CORO2BQ9UQ03 480 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 KLHL20Q9Y2M5 609 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 GMEB1Q9Y692 573 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 KIR2DS5A0A0G2JLQ3 304 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 A0A0G2JNG1 304 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 KIR2DS3K7RE56 304 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 BTF3P20290 206 aaKnown RBP13.59□□□□□ -0.23
C9orf3-202ENST00000297979 ARPC4P59998 168 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 UBE2IP63279 158 aaKnown RBP13.59□□□□□ -0.23
C9orf3-202ENST00000297979 KIR2DS5Q14953 304 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 MPEG1Q2M385 716 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 OR4C11Q6IEV9 310 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 PAQR7Q86WK9 346 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 DCP2Q8IU60 420 aaKnown RBP13.59□□□□□ -0.23
C9orf3-202ENST00000297979 MMP21Q8N119 569 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 DEFB119Q8N690 84 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 TM4SF18Q96CE8 201 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 C17orf62Q9BQA9 187 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 PCDHGA2Q9Y5H1 932 aa13.59□□□□□ -0.23
C9orf3-202ENST00000297979 ZW10O43264 779 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 C6orf47O95873 294 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 C1QCP02747 245 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 RETP07949 1114 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 ABCB1P08183 1280 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-202ENST00000297979 FUT4P22083 530 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 SSR2P43308 183 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 PLA2G16P53816 162 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 HBA1P69905 142 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 HEPACAMQ14CZ8 416 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 ADPRMQ3LIE5 342 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 FAM98BQ52LJ0 330 aaKnown RBP13.58□□□□□ -0.24
C9orf3-202ENST00000297979 CADM4Q8NFZ8 388 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 FLVCR1-AS1Q8TAF5 88 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 ZFP90Q8TF47 636 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 RNF145Q96MT1 663 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 ARHGEF17Q96PE2 2063 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-202ENST00000297979 AICDAQ9GZX7 198 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 APOBEC3BQ9UH17 382 aaKnown RBP13.58□□□□□ -0.24
C9orf3-202ENST00000297979 A0A0A6YYD5 115 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 TMPRSS11DO60235 418 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 CREG1O75629 220 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 STATHP02808 62 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 UQCRBP14927 111 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 DDX5P17844 614 aaKnown RBP13.58□□□□□ -0.24
C9orf3-202ENST00000297979 HYAL2Q12891 473 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 IRGCQ6NXR0 463 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 ERICH5Q6P6B1 374 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 MFSD2AQ8NA29 543 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 FAM47BQ8NA70 645 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 OR10G6Q8NH81 332 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 PNPT1Q8TCS8 783 aaKnown RBP13.58□□□□□ -0.24
C9orf3-202ENST00000297979 SLC37A2Q8TED4 501 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 CENPNQ96H22 339 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-202ENST00000297979 TEFMQ96QE5 360 aaKnown RBP13.58□□□□□ -0.24
C9orf3-202ENST00000297979 OR2A14Q96R47 310 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 CHID1Q9BWS9 393 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 UGT2B28Q9BY64 529 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 SLC6A16Q9GZN6 736 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 ACTR10Q9NZ32 417 aa13.58□□□□□ -0.24
C9orf3-202ENST00000297979 A0A0G2JN53 185 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 GSAPA4D1B5 854 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 OR6C74A6NCV1 312 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 STK25O00506 426 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 TBX19O60806 448 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 RAP2AP10114 183 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 UGT2B7P16662 529 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 JUNDP17535 347 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 HSD17B7P56937 341 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 RPS15AP62244 130 aaKnown RBP13.57□□□□□ -0.24
C9orf3-202ENST00000297979 TRA2BP62995 288 aaKnown RBP13.57□□□□□ -0.24
C9orf3-202ENST00000297979 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 CPZQ66K79 652 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 THOC7Q6I9Y2 204 aaKnown RBP13.57□□□□□ -0.24
C9orf3-202ENST00000297979 GPR153Q6NV75 609 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 ZZZ3Q8IYH5 903 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 NAGSQ8N159 534 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 GALNT4Q8N4A0 578 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 TRIML2Q8N7C3 387 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 PJA1Q8NG27 643 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 FBXO30Q8TB52 745 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 CLDN23Q96B33 292 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 MS4A6EQ96DS6 147 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 CIB1Q99828 191 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 SPATA9Q9BWV2 254 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 KLHL31Q9H511 634 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 PRDM6Q9NQX0 595 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 A0A1W2PRB8 838 aa13.57□□□□□ -0.24
C9orf3-202ENST00000297979 FAM149AA5PLN7 773 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms