RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 ATG16L2Q8NAA4 619 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 BPIFB6Q8NFQ5 453 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 OR4K1Q8NGD4 311 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 CNIH3Q8TBE1 160 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 DYNC2LI1Q8TCX1 351 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 CYB5D2Q8WUJ1 264 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 POF1BQ8WVV4 589 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 APOBEC4Q8WW27 367 aaKnown RBP6.31□□□□□ -1.4
DEFB1-201ENST00000297439 APH1BQ8WW43 257 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 RASSF5Q8WWW0 418 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 OR5P2Q8WZ92 322 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 MYDGFQ969H8 173 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 SLC38A4Q969I6 547 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 ARRDC3Q96B67 414 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 NEURL3Q96EH8 262 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 SH3YL1Q96HL8 342 aaPredicted RBP6.31□□□□□ -1.4
DEFB1-201ENST00000297439 BARD1Q99728 777 aaKnown RBP6.31□□□□□ -1.4
DEFB1-201ENST00000297439 MAPKAP1Q9BPZ7 522 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 DPH2Q9BQC3 489 aaPredicted RBP6.31□□□□□ -1.4
DEFB1-201ENST00000297439 SLC35A5Q9BS91 424 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 RACGAP1Q9H0H5 632 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 RIBC2Q9H4K1 309 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 ACSS1Q9NUB1 689 aaPredicted RBP6.31□□□□□ -1.4
DEFB1-201ENST00000297439 EHD3Q9NZN3 535 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 CNOT2Q9NZN8 540 aaKnown RBP6.31□□□□□ -1.4
DEFB1-201ENST00000297439 WARS2Q9UGM6 360 aaKnown RBP6.31□□□□□ -1.4
DEFB1-201ENST00000297439 PSORS1C1Q9UIG5 152 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 PCDHGA2Q9Y5H1 932 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 ENPP4Q9Y6X5 453 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 U3KQV3 271 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 NOTCH4Q99466 2003 aa6.31□□□□□ -1.4
DEFB1-201ENST00000297439 ANKRD12Q6UB98 2062 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 DSPPQ9NZW4 1301 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 CROCCQ5TZA2 2017 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 KIAA1549LQ6ZVL6 1849 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 A0A1W2PRB8 838 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 FAM181BA6NEQ2 426 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 CLCA1A8K7I4 914 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 MYO1GB0I1T2 1018 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 hCG_2039718K7EN88 272 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 TNFRSF11BO00300 401 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 PLK4O00444 970 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 KPNA3O00505 521 aaPredicted RBP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 XPNPEP2O43895 674 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 FAM20BO75063 409 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 RFPL2O75678 378 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 POP7O75817 140 aaKnown RBP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 SLITRK5O94991 958 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 ZBTB11O95625 1053 aaPredicted RBP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 ADAP00813 363 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 MT-ND2P03891 347 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 ALOX5P09917 674 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 HLA-EP13747 358 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 ETFAP13804 333 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 CEBPBP17676 345 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 CBLP22681 906 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 TPP2P29144 1249 aaPredicted RBP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 CD40LGP29965 261 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 RRM2P31350 389 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 CA8P35219 290 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 CTNNB1P35222 781 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 TGFBR2P37173 567 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 MLLT10P55197 1068 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 ENPP2Q13822 863 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 DDX39BQ13838 428 aaKnown RBP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 SIM2Q14190 667 aaPredicted RBP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 IRF3Q14653 427 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 HEPACAMQ14CZ8 416 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 SLC5A12Q1EHB4 618 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 RGS21Q2M5E4 152 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 TMEM201Q5SNT2 666 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 CATSPEREQ5SY80 951 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 PRAMEF8Q5VWM4 474 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 FAM46CQ5VWP2 391 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 KHDRBS2Q5VWX1 349 aaKnown RBP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 PRAMEF7Q5VXH5 474 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 METRNLQ641Q3 311 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 LAIR1Q6GTX8 287 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 RAET1GQ6H3X3 334 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 ZNF770Q6IQ21 691 aaPredicted RBP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 REEP3Q6NUK4 255 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 NIPAL1Q6NVV3 410 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 C19orf48Q6RUI8 117 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 VN1R5Q7Z5H4 357 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 C17orf64Q86WR6 236 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 TRAPPC5Q8IUR0 188 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 LACC1Q8IV20 430 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 P3H2Q8IVL5 708 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 CFAP206Q8IYR0 622 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 RNF175Q8N4F7 328 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 LINC00471Q8N535 108 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 LILRA3Q8N6C8 439 aaPredicted RBP6.3□□□□□ -1.4
DEFB1-201ENST00000297439 GALNT6Q8NCL4 622 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 ZNF540Q8NDQ6 660 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 TTLQ8NG68 377 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 OR10G2Q8NGC3 310 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 OR5K2Q8NHB8 316 aa6.3□□□□□ -1.4
DEFB1-201ENST00000297439 SORCS1Q8WY21 1168 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms