RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 CREG1O75629 220 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 CD38P28907 300 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 GABRA3P34903 492 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 PUDPQ08623 228 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 SYVN1Q86TM6 617 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 CEP97Q8IW35 865 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 MCFD2Q8NI22 146 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 NAT6Q93015 286 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 CLCC1Q96S66 551 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 ZFYVE21Q9BQ24 234 aa17.02■□□□□ 0.32
CDC42EP3-201ENST00000295324 LATO43561 262 aa17.02■□□□□ 0.31
CDC42EP3-201ENST00000295324 NOBOXO60393 691 aa17.02■□□□□ 0.31
CDC42EP3-201ENST00000295324 IL33O95760 270 aa17.02■□□□□ 0.31
CDC42EP3-201ENST00000295324 TMCO6Q96DC7 493 aa17.02■□□□□ 0.31
CDC42EP3-201ENST00000295324 PLCL2Q9UPR0 1127 aa17.02■□□□□ 0.31
CDC42EP3-201ENST00000295324 SIT1Q9Y3P8 196 aa17.02■□□□□ 0.31
CDC42EP3-201ENST00000295324 PRRC2BQ5JSZ5 2229 aaKnown RBP17.02■□□□□ 0.31
CDC42EP3-201ENST00000295324 HYKKA2RU49 373 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 SLC6A9P48067 706 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 UNC50Q53HI1 259 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 FAM174AQ8TBP5 190 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 CMKLR1Q99788 373 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 SLC39A3Q9BRY0 314 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 ACTR3BQ9P1U1 418 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 PRDM4Q9UKN5 801 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 PRODHO43272 600 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 TGFBR2P37173 567 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 CBX5P45973 191 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 GDI2P50395 445 aaKnown RBP17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 SMSP52788 366 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 GBX2P52951 348 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 GRIN2CQ14957 1233 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 SLC14A2Q15849 920 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 GHDCQ8N2G8 530 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 NUP43Q8NFH3 380 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 RAB8BQ92930 207 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 NSUN5Q96P11 429 aaKnown RBP17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 TCF7L1Q9HCS4 588 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 HCRTR2O43614 444 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 FGF3P11487 239 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 AOC1P19801 751 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 ITGA3P26006 1051 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 PYURFQ96I23 114 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 PORP16435 677 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 GSTT1P30711 240 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 FCHO2Q0JRZ9 810 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 EGFLAMQ63HQ2 1017 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 OR4C11Q6IEV9 310 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 KDELC1Q6UW63 502 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 OR5T3Q8NGG3 340 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 FBXL8Q96CD0 374 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 PDCD10Q9BUL8 212 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 FBRSL1Q9HCM7 1045 aaKnown RBP17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 ANXA2P2A6NMY6 339 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 E7EQ34 232 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 ANXA2P07355 339 aaKnown RBP17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 TIMP2P16035 220 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 HLA-FP30511 346 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 RLN3Q8WXF3 142 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 MCHR1Q99705 422 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 COPS4Q9BT78 406 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 PELI2Q9HAT8 420 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 GIMAP2Q9UG22 337 aa17.01■□□□□ 0.31
CDC42EP3-201ENST00000295324 FEZF1A0PJY2 475 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 BCAS2O75934 225 aaPredicted RBP17■□□□□ 0.31
CDC42EP3-201ENST00000295324 AK1P00568 194 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 PRKAR1AP10644 381 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 SDC2P34741 201 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 FADDQ13158 208 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 C1orf189Q5VU69 101 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 RBM44Q6ZP01 1051 aaKnown RBP17■□□□□ 0.31
CDC42EP3-201ENST00000295324 COQ8BQ96D53 544 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 ABCB10Q9NRK6 738 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 MKS1Q9NXB0 559 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 E7ENX8 843 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 HSD11B1P28845 292 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 CLDN2P57739 230 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 KCNC4Q03721 635 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 QPRTQ15274 297 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 DEFB133Q30KQ1 61 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 CANT1Q8WVQ1 401 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 CHMP1AQ9HD42 196 aaPredicted RBP17■□□□□ 0.31
CDC42EP3-201ENST00000295324 GFRA2O00451 464 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 CSTAP01040 98 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 F11P03951 625 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 ZNF20P17024 532 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 TRAM2Q15035 370 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 HSD11B1LQ7Z5J1 315 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 ZNF676Q8N7Q3 588 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 HUS1BQ8NHY5 278 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 UFD1Q92890 307 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 COQ10BQ9H8M1 238 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 OBP2AQ9NY56 170 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 PEX2P28328 305 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 HOXD9P28356 352 aaPredicted RBP17■□□□□ 0.31
CDC42EP3-201ENST00000295324 DIO3P55073 304 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 NR0B2Q15466 257 aa17■□□□□ 0.31
CDC42EP3-201ENST00000295324 KHDC1Q4VXA5 237 aaKnown RBP17■□□□□ 0.31
CDC42EP3-201ENST00000295324 RASSF6Q6ZTQ3 369 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms