RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 HMGN1P05114 100 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 HTR7P34969 479 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 EXOC3L2Q2M3D2 409 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 C22orf42Q6IC83 251 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 TMIEQ8NEW7 156 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 CMTM7Q96FZ5 175 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 METTL7AQ9H8H3 244 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 GJD2Q9UKL4 321 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 PCYT1BQ9Y5K3 369 aaPredicted RBP15.57■□□□□ 0.08
SSRP1-202ENST00000293880 CFIP05156 583 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 RAB4AP20338 218 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 TMEM44Q2T9K0 475 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 SLC39A4Q6P5W5 647 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 NPLOC4Q8TAT6 608 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 CLEC4DQ8WXI8 215 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 FCRL5Q96RD9 977 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 M0R2N6 131 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 HTRA2O43464 458 aaPredicted RBP15.57■□□□□ 0.08
SSRP1-202ENST00000293880 AOC1P19801 751 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 ERVK-25P63136 954 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 HNRNPDQ14103 355 aaKnown RBP15.57■□□□□ 0.08
SSRP1-202ENST00000293880 ZNF674Q2M3X9 581 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 FAM46DQ8NEK8 389 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 CD180Q99467 661 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 ZIM2Q9NZV7 527 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 ZFR2Q9UPR6 939 aaKnown RBP15.57■□□□□ 0.08
SSRP1-202ENST00000293880 WASHC1A8K0Z3 465 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 ARVCFO00192 962 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 SLITRK5O94991 958 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 KCNQ1P51787 676 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 WASH2PQ6VEQ5 465 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 TOR1AIP2Q8NFQ8 470 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 OR13C3Q8NGS6 347 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 KLRG1Q96E93 195 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 NSUN5Q96P11 429 aaKnown RBP15.57■□□□□ 0.08
SSRP1-202ENST00000293880 P2RY13Q9BPV8 354 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 SARDHQ9UL12 918 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 LRRN3E7EW58 273 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 SYN3O14994 580 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 HSPA12AO43301 675 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 OR12D1P0DN82 309 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 SLC44A3Q8N4M1 653 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 SMARCD2Q92925 531 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 MUS81Q96NY9 551 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 SCGB3A2Q96PL1 93 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 LRRN3Q9H3W5 708 aa15.57■□□□□ 0.08
SSRP1-202ENST00000293880 IGLV3-22A0A075B6J6 115 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 A0A1B0GVC2 190 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 CLCA1A8K7I4 914 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 OGDHQ02218 1023 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 MOGQ16653 247 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 CLDN19Q8N6F1 224 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 ADAMTS6Q9UKP5 1117 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 TTLL8A6PVC2 850 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 RPS17P08708 135 aaKnown RBP15.56■□□□□ 0.08
SSRP1-202ENST00000293880 GSTM3P21266 225 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 F8A1P23610 371 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 SLC18A1P54219 525 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 FKBP1BP68106 108 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 CDK10Q15131 360 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 CHRFAM7AQ494W8 412 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 CFAP77Q6ZQR2 320 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 MAPKAP1Q9BPZ7 522 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 TREX2Q9BQ50 279 aaPredicted RBP15.56■□□□□ 0.08
SSRP1-202ENST00000293880 OR6C6A6NF89 314 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 IL7P13232 177 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 TYRP1P17643 537 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 ACVR1BP36896 505 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 LSSP48449 732 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 CDNFQ49AH0 187 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 ZNF678Q5SXM1 525 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 MARVELD2Q8N4S9 558 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 AURKBQ96GD4 344 aaPredicted RBP15.56■□□□□ 0.08
SSRP1-202ENST00000293880 CDKN2AIPNLQ96HQ2 116 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 FBXL18Q96ME1 805 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 OR10A4Q9H209 315 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 NUFIP1Q9UHK0 495 aaKnown RBP15.56■□□□□ 0.08
SSRP1-202ENST00000293880 PCDHGB1Q9Y5G3 927 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 A0A1B0GVI7 797 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 ZNF860A6NHJ4 632 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 GOSR2O14653 212 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 CRYZL1O95825 349 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 TNFP01375 233 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 DLK2Q6UY11 383 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 OR4K17Q8NGC6 315 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 CAMK1GQ96NX5 476 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 BIN3Q9NQY0 253 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 MGAT4CQ9UBM8 478 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 F5H0A9 414 aaPredicted RBP15.56■□□□□ 0.08
SSRP1-202ENST00000293880 GMPRP36959 345 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 ST3GAL4Q11206 333 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 LASP1Q14847 261 aaKnown RBP15.56■□□□□ 0.08
SSRP1-202ENST00000293880 FCRLBQ6BAA4 426 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 SHFQ7M4L6 423 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 TCEAL4Q96EI5 215 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 STRA6Q9BX79 667 aa15.56■□□□□ 0.08
SSRP1-202ENST00000293880 RCBTB2O95199 551 aa15.55■□□□□ 0.08
SSRP1-202ENST00000293880 CNOT4O95628 575 aaKnown RBP15.55■□□□□ 0.08
SSRP1-202ENST00000293880 FBXO43Q4G163 708 aa15.55■□□□□ 0.08
SSRP1-202ENST00000293880 FBXL22Q6P050 247 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms