RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 HNRNPKP61978 463 aaKnown RBP eCLIP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 FOXK1P85037 733 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 GPRC6AQ5T6X5 926 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 TMPRSS7Q7RTY8 843 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 TRIM46Q7Z4K8 759 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 LDB1Q86U70 411 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 INPP4AQ96PE3 977 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SDHAF2Q9NX18 166 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 NRXN1Q9ULB1 1477 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SLC31A1O15431 190 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CILPO75339 1184 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 NPPAP01160 153 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ASPAP45381 313 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CDK6Q00534 326 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SLC39A4Q6P5W5 647 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 MROQ9BYG7 248 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SAMD10Q9BYL1 202 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 RETREG1Q9H6L5 497 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 NANSQ9NR45 359 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CTPS2Q9NRF8 586 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ARHGAP23Q9P227 1491 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SNRNP200O75643 2136 aaKnown RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 hCG_1807616A0A1W2PRN6 198 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 C2orf74A8MZ97 194 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 BOLA2-SMG1P6H3BVE0 249 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SELPP16109 830 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF43P17038 809 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF8P17098 575 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 DNASE1P24855 282 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 RPS3AP61247 264 aaKnown RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SSX2Q16385 188 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ARSHQ5FYA8 562 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 WDR53Q7Z5U6 358 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 OR5M3Q8NGP4 307 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 OR8K3Q8NH51 312 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SLC41A3Q96GZ6 507 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 OR51I1Q9H343 314 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 IL17RBQ9NRM6 502 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CLEC4EQ9ULY5 219 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF705FA8MVS1 300 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ANKRD28O15084 1053 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 DNAJB6O75190 326 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 RBBP9O75884 186 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CNOT4O95628 575 aaKnown RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF705DP0CH99 300 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF705BP0CI00 300 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 GAD2Q05329 585 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 RFWD3Q6PCD5 774 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 DPY19L3Q6ZPD9 716 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 TMPPEQ6ZT21 453 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF767PQ75MW2 155 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ELMOD2Q8IZ81 293 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 PYROXD2Q8N2H3 581 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 PHOSPHO1Q8TCT1 267 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CPT1BQ92523 772 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ARL5BQ96KC2 179 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 TAS2R8Q9NYW2 309 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CYP8B1Q9UNU6 501 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 MGAT4BQ9UQ53 548 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 HCN4Q9Y3Q4 1203 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZFP37Q9Y6Q3 630 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ECI2O75521 394 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 PSMD10O75832 226 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 NUDT7P0C024 238 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 OR8U9P0C7N5 309 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ADRB3P13945 408 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CHRNB2P17787 502 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 FKBP1AP62942 108 aaKnown RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 KCNC4Q03721 635 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 COMMD7Q86VX2 200 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 GATA5Q9BWX5 397 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SRRDQ9UH36 339 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 FAM237AA0A1B0GTK4 181 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 FASLGP48023 281 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF169Q14929 603 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 PTPRRQ15256 657 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 DPY19L4Q7Z388 723 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF100Q8IYN0 542 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 HIF1ANQ9NWT6 349 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 POU2F3Q9UKI9 436 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 TP53TG5Q9Y2B4 290 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 NUP214P35658 2090 aaPredicted RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 A8MUA0 341 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 B4DGG1 531 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 NT5C1B-RDH14C9J2C7 533 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 STMND1H3BQB6 276 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 TAS2R39P59534 338 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CYCSP99999 105 aaKnown RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 DPYSL2Q16555 572 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SLC24A5Q71RS6 500 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 OR5H2Q8NGV7 314 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 OR5AK3PQ8NH89 298 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 SMPDL3AQ92484 453 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 CARS2Q9HA77 564 aaKnown RBP8.44□□□□□ -1.06
NIPBL-201ENST00000282516 PCM1Q15154 2024 aa8.44□□□□□ -1.06
NIPBL-201ENST00000282516 FER1L6Q2WGJ9 1857 aa8.43□□□□□ -1.06
NIPBL-201ENST00000282516 EDDM13A0A1B0GTR0 161 aa8.43□□□□□ -1.06
NIPBL-201ENST00000282516 NEMP2A6NFY4 417 aa8.43□□□□□ -1.06
NIPBL-201ENST00000282516 C12orf71A8MTZ7 269 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms