RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 GPR85P60893 370 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 ACTN3Q08043 901 aaPredicted RBP8.34□□□□□ -1.07
TPM3-201ENST00000271850 XKR6Q5GH73 641 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 SPANXN3Q5MJ09 141 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 STEAP4Q687X5 459 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 LRRC8EQ6NSJ5 796 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 NXPE4Q6UWF7 544 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 KIAA0408Q6ZU52 694 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 TMPRSS11BQ86T26 416 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 CD163Q86VB7 1156 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 THOC6Q86W42 341 aaKnown RBP8.34□□□□□ -1.07
TPM3-201ENST00000271850 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.34□□□□□ -1.07
TPM3-201ENST00000271850 ZNF321PQ8N8H1 164 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 GPATCH11Q8N954 259 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 C16orf52Q8NHV5 167 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 RNF217Q8TC41 542 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 ACTRT1Q8TDG2 376 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 PDLIM2Q96JY6 352 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 PBKQ96KB5 322 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 QRFPRQ96P65 431 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 OSBPL9Q96SU4 736 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 VKORC1Q9BQB6 163 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 FAM129AQ9BZQ8 928 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 DDX47Q9H0S4 455 aaKnown RBP8.34□□□□□ -1.07
TPM3-201ENST00000271850 RHBGQ9H310 441 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 LIN28AQ9H9Z2 209 aaKnown RBP8.34□□□□□ -1.07
TPM3-201ENST00000271850 PELI2Q9HAT8 420 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 ITGB1BP2Q9UKP3 347 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 SLC22A14Q9Y267 594 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 DNHD1Q96M86 4753 aa8.34□□□□□ -1.07
TPM3-201ENST00000271850 INTS1Q8N201 2190 aaKnown RBP8.34□□□□□ -1.08
TPM3-201ENST00000271850 TRBV11-1A0A0K0K1C0 115 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 MYOCOSA0A1B0GUC4 107 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 NKX2-6A6NCS4 301 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 PGRMC1O00264 195 aaKnown RBP8.33□□□□□ -1.08
TPM3-201ENST00000271850 PEX1O43933 1283 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 ITGA10O75578 1167 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 PIAS1O75925 651 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 TOXO94900 526 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 MYBL2P10244 700 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 ABOP16442 354 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 CD22P20273 847 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 JAK1P23458 1154 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 GRK3P35626 688 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 ELK3P41970 407 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 GDF5P43026 501 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 CASP6P55212 293 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 TAS2R50P59544 299 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 IL2P60568 153 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 TLE4Q04727 773 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 FASTKD3Q14CZ7 662 aaKnown RBP8.33□□□□□ -1.08
TPM3-201ENST00000271850 BBS9Q3SYG4 887 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 FBXO48Q5FWF7 155 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 TOR1AIP1Q5JTV8 583 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 SLCO4C1Q6ZQN7 724 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 ABHD13Q7L211 337 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 CEP97Q8IW35 865 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 KLHDC8AQ8IYD2 350 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 SLC35F6Q8N357 371 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 ZFP62Q8NB50 900 aaPredicted RBP8.33□□□□□ -1.08
TPM3-201ENST00000271850 B3GNT7Q8NFL0 401 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 FAM57AQ8TBR7 257 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 SREK1Q8WXA9 508 aaKnown RBP8.33□□□□□ -1.08
TPM3-201ENST00000271850 NCLNQ969V3 563 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 SDCCAG3Q96C92 435 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 MS4A6EQ96DS6 147 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 PDLIM5Q96HC4 596 aaKnown RBP8.33□□□□□ -1.08
TPM3-201ENST00000271850 TMEM79Q9BSE2 394 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 UCK2Q9BZX2 261 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 SMYD2Q9NRG4 433 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 PPT2Q9UMR5 302 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 CHMP2BQ9UQN3 213 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 VWA7Q9Y334 891 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 JRKLQ9Y4A0 524 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 LIPGQ9Y5X9 500 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 TEX264Q9Y6I9 313 aa8.33□□□□□ -1.08
TPM3-201ENST00000271850 AKAP6Q13023 2319 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 ITPR3Q14573 2671 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 EML6Q6ZMW3 1958 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 CYR61O00622 381 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 CDK2AP1O14519 115 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 TAPBPO15533 448 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 MYO1DO94832 1006 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 OR6B1O95007 311 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 TTC4O95801 387 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 SERPINA6P08185 405 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 ENO2P09104 434 aaPredicted RBP8.32□□□□□ -1.08
TPM3-201ENST00000271850 HIST1H2AGP0C0S8 130 aaPredicted RBP8.32□□□□□ -1.08
TPM3-201ENST00000271850 RNH1P13489 461 aaKnown RBP8.32□□□□□ -1.08
TPM3-201ENST00000271850 EPORP19235 508 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 HIST1H2ADP20671 130 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 SSTR2P30874 369 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 RIPPLY3P57055 190 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 TAS2R39P59534 338 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 BTN3A2P78410 334 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 RGS1Q08116 209 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 CSHL1Q14406 222 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 TSNQ15631 228 aaKnown RBP8.32□□□□□ -1.08
TPM3-201ENST00000271850 ADPRMQ3LIE5 342 aa8.32□□□□□ -1.08
TPM3-201ENST00000271850 FAM45BPQ6NSW5 357 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms