RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 DFFBO76075 338 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 LATS1O95835 1130 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 HOXB2P14652 356 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 RAB28P51157 221 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 IDH3GP51553 393 aaPredicted RBP12.84□□□□□ -0.35
PRDM16-201ENST00000270722 CRB2Q5IJ48 1285 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 PRSS58Q8IYP2 241 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 MAPK15Q8TD08 544 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 SMARCD2Q92925 531 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 OR51V1Q9H2C8 321 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 CDH10Q9Y6N8 788 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 ANKRD33BA6NCL7 494 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 MLIPQ5VWP3 458 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 GDPD4Q6W3E5 623 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 CD99L2Q8TCZ2 262 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 INPP4AQ96PE3 977 aaPredicted RBP12.84□□□□□ -0.35
PRDM16-201ENST00000270722 KLHL13Q9P2N7 655 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 OR7A17O14581 309 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 CTDNEP1O95476 244 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 ETFAP13804 333 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 WASP42768 502 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 PCDHB18PQ96TA0 734 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 SLC45A1Q9Y2W3 748 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 FER1L4A9Z1Z3 1794 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 MT-CO2P00403 227 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 ST3GAL3Q11203 375 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 FXNQ16595 210 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 LINGO2Q7L985 606 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 PDE10AQ9Y233 779 aa12.84□□□□□ -0.35
PRDM16-201ENST00000270722 HEXBP07686 556 aa12.83□□□□□ -0.35
PRDM16-201ENST00000270722 FSTL1Q12841 308 aa12.83□□□□□ -0.35
PRDM16-201ENST00000270722 MTMR14Q8NCE2 650 aa12.83□□□□□ -0.35
PRDM16-201ENST00000270722 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.35
PRDM16-201ENST00000270722 SIRPGQ9P1W8 387 aa12.83□□□□□ -0.35
PRDM16-201ENST00000270722 RIMKLBQ9ULI2 386 aa12.83□□□□□ -0.35
PRDM16-201ENST00000270722 ABCA6Q8N139 1617 aa12.83□□□□□ -0.35
PRDM16-201ENST00000270722 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 AGAP14A8MT82 685 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 NT5C1B-RDH14C9J2C7 533 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 PAPSS1O43252 624 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 DLX3O60479 287 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 IFNGR1P15260 489 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 S1PR1P21453 382 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 RIDAP52758 137 aaKnown RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 HK3P52790 923 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 RPL23AP62750 156 aaKnown RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 TLE2Q04725 743 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 TARDBPQ13148 414 aaKnown RBP eCLIP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 KIAA0907Q7Z7F0 614 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 ZDHHC3Q9NYG2 299 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 KCNIP1Q9NZI2 227 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 MAP2K7O14733 419 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 BCAS2O75934 225 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 SHMT2P34897 504 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 DCUN1D3Q8IWE4 304 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 SUV39H2Q9H5I1 410 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 LRRC4CQ9HCJ2 640 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 PLLPQ9Y342 182 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 Q9Y3F1 56 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 ZNF99A8MXY4 864 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 B4DGG1 531 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 K7EPI3 171 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 MT-ND2P03891 347 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 STAG3L2P0CL84 134 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 CD9P21926 228 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 TAS2R39P59534 338 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 ZNF627Q7L945 461 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 ABHD12BQ7Z5M8 362 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 ZNF100Q8IYN0 542 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 CASD1Q96PB1 797 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 MADDQ8WXG6 1647 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 AGAP5A6NIR3 686 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 LCMT2O60294 686 aaKnown RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 GLSO94925 669 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 C2P06681 752 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 CD72P21854 359 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 C16orf46Q6P387 395 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 AHSA2Q719I0 299 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 KCNH6Q9H252 994 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 KCND1Q9NSA2 647 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 CENPMQ9NSP4 180 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 NPHS1O60500 1241 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 MT-CYBP00156 380 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 SPATA31D3P0C874 917 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 KCNC3Q14003 757 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 SPATA31D4Q6ZUB0 917 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 TEX13DA0A0J9YY54 714 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 GK2Q14410 553 aaPredicted RBP12.83□□□□□ -0.36
PRDM16-201ENST00000270722 SLC29A3Q9BZD2 475 aa12.83□□□□□ -0.36
PRDM16-201ENST00000270722 PIP5K1BO14986 540 aa12.82□□□□□ -0.36
PRDM16-201ENST00000270722 PCDH7O60245 1069 aa12.82□□□□□ -0.36
PRDM16-201ENST00000270722 CILPO75339 1184 aa12.82□□□□□ -0.36
PRDM16-201ENST00000270722 OGDHQ02218 1023 aa12.82□□□□□ -0.36
PRDM16-201ENST00000270722 PRAMEF19Q5SWL8 479 aa12.82□□□□□ -0.36
PRDM16-201ENST00000270722 ZNF782Q6ZMW2 699 aaPredicted RBP12.82□□□□□ -0.36
PRDM16-201ENST00000270722 C19orf35Q6ZS72 473 aa12.82□□□□□ -0.36
PRDM16-201ENST00000270722 ADIPOR2Q86V24 386 aa12.82□□□□□ -0.36
PRDM16-201ENST00000270722 TOMM5Q8N4H5 51 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms