RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 APOBEC4Q8WW27 367 aaKnown RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 IRF7Q92985 503 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 COL21A1Q96P44 957 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 ZBTB20Q9HC78 741 aaPredicted RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 MYNNQ9NPC7 610 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 DMRT3Q9NQL9 472 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 PNMA8BQ9ULN7 279 aaPredicted RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 PAIP2BQ9ULR5 123 aaKnown RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 SLC6A14Q9UN76 642 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 KCNE2Q9Y6J6 123 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 PRAMEF33A0A0G2JMD5 474 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 ISPDA4D126 451 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 CARNS1A5YM72 827 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 AGAP5A6NIR3 686 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 NEDD8-MDP1E9PL57 170 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 PRAMEF10O60809 474 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 SOD1P00441 154 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 LRG1P02750 347 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 SRPRAP08240 638 aaKnown RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 ADORA3P0DMS8 318 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 C1GALT1C1LP0DN25 315 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 ARAFP10398 606 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 MMP12P39900 470 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 CRATP43155 626 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 OR1E2P47887 323 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 ERVFC1P60507 584 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 MC1RQ01726 317 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 DNASE1L3Q13609 305 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 EIF4HQ15056 248 aaKnown RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 FBXO43Q4G163 708 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 SYTL3Q4VX76 610 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 ZNF770Q6IQ21 691 aaPredicted RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 DSG4Q86SJ6 1040 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 SLC22A16Q86VW1 577 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.91□□□□□ -0.5
BEST3-201ENST00000266661 METTL4Q8N3J2 472 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 NFKBIDQ8NI38 313 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 ZNF675Q8TD23 568 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 C16orf78Q8WTQ4 265 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 SLC35A5Q9BS91 424 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 RSPO3Q9BXY4 272 aaPredicted RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 LINC00597Q9H2U6 94 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 SP140LQ9H930 580 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 CCDC59Q9P031 241 aaKnown RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 FAM8A1Q9UBU6 413 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 FTSJ1Q9UET6 329 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 TSC22D4Q9Y3Q8 395 aa11.91□□□□□ -0.5
BEST3-201ENST00000266661 CFAP20Q9Y6A4 193 aaKnown RBP11.91□□□□□ -0.5
BEST3-201ENST00000266661 MYOFQ9NZM1 2061 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 DOCK6Q96HP0 2047 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 GNG14A0A1W2PPG7 69 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 ARRDC5A6NEK1 342 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 J3KTA2 159 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 PCDH17O14917 1159 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 SPINT1O43278 529 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 CNOT3O75175 753 aaKnown RBP11.9□□□□□ -0.5
BEST3-201ENST00000266661 PTHP01270 115 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 C8AP07357 584 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 STSP08842 583 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 TYRP14679 529 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 SLC15A1P46059 708 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 CRISP3P54108 245 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 EPHA5P54756 1037 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 CDH12P55289 794 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 TBPL1P62380 186 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 GPM6BQ13491 265 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 DOC2BQ14184 412 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 SLC5A12Q1EHB4 618 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 ZNF630Q2M218 657 aaPredicted RBP11.9□□□□□ -0.5
BEST3-201ENST00000266661 ZNF284Q2VY69 593 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 BCL7AQ4VC05 210 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 ZNF805Q5CZA5 627 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 TMEM220Q6QAJ8 160 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 USP43Q70EL4 1123 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 TMPRSS11BQ86T26 416 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 NRSN1Q8IZ57 195 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 DEPDC4Q8N2C3 294 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 OXR1Q8N573 874 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 PSMA8Q8TAA3 256 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 CIDECQ96AQ7 238 aaPredicted RBP11.9□□□□□ -0.5
BEST3-201ENST00000266661 REPS1Q96D71 796 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 MTERF3Q96E29 417 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 COQ10AQ96MF6 247 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 EFCAB11Q9BUY7 163 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 CDCA4Q9BXL8 241 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 SPNS1Q9H2V7 528 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 AMBNQ9NP70 447 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 PRDM8Q9NQV8 689 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 SPHK2Q9NRA0 654 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 QPCTLQ9NXS2 382 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 GPR83Q9NYM4 423 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 ANKMY1Q9P2S6 941 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 KCND3Q9UK17 655 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.9□□□□□ -0.5
BEST3-201ENST00000266661 KLK4Q9Y5K2 254 aa11.9□□□□□ -0.5
BEST3-201ENST00000266661 DSPPQ9NZW4 1301 aa11.9□□□□□ -0.51
BEST3-201ENST00000266661 PCM1Q15154 2024 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 PIPSLA2A3N6 862 aa11.89□□□□□ -0.51
BEST3-201ENST00000266661 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms