RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SIKE1Q9BRV8 207 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 GPR87Q9BY21 358 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 MRPL1Q9BYD6 325 aaKnown RBP13.5□□□□□ -0.25
SSBP1-201ENST00000265304 CHST8Q9H2A9 424 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 MKKSQ9NPJ1 570 aaPredicted RBP13.5□□□□□ -0.25
SSBP1-201ENST00000265304 IRAK4Q9NWZ3 460 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 C1orf109Q9NX04 203 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 ASIC5Q9NY37 505 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 MCM8Q9UJA3 840 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 DAPP1Q9UN19 280 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 SLC12A4Q9UP95 1085 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 TMED5Q9Y3A6 229 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 ASB4Q9Y574 426 aa13.5□□□□□ -0.25
SSBP1-201ENST00000265304 DOCK10Q96BY6 2186 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 ZFHX4Q86UP3 3567 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 CELSR3Q9NYQ7 3312 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 TRPC5OSA6NMA1 111 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 SRRM3A6NNA2 597 aaPredicted RBP13.49□□□□□ -0.25
SSBP1-201ENST00000265304 TCP11X1B4DZS4 312 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 CYR61O00622 381 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 CHST10O43529 356 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 B3GALT2O43825 422 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 DNAJB6O75190 326 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
SSBP1-201ENST00000265304 KLF7O75840 302 aaPredicted RBP13.49□□□□□ -0.25
SSBP1-201ENST00000265304 CCNYL3P0C7X3 344 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 LINC00032P0C843 101 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 PLA2G16P53816 162 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 BTN3A2P78410 334 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 HMGCS1Q01581 520 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 CRTC2Q53ET0 693 aaPredicted RBP13.49□□□□□ -0.25
SSBP1-201ENST00000265304 C6orf136Q5SQH8 315 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 SCIMPQ6UWF3 145 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 NUDT13Q86X67 352 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 ZCCHC10Q8TBK6 192 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 ACTRT2Q8TDY3 377 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 ADAMTS18Q8TE60 1221 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.49□□□□□ -0.25
SSBP1-201ENST00000265304 NACC2Q96BF6 587 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 APIPQ96GX9 242 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 PPP3R2Q96LZ3 170 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 DPH1Q9BZG8 443 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 MS4A12Q9NXJ0 267 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 PTGDR2Q9Y5Y4 395 aa13.49□□□□□ -0.25
SSBP1-201ENST00000265304 TEX51A0A1B0GUA7 166 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 A0A1W2PQ72 361 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 BLACEA4D250 179 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 SGK494L7N484 410 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 RTCAO00442 366 aaKnown RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 SDHDO14521 159 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 PROM1O43490 865 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 TLX3O43711 291 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 TMPRSS11DO60235 418 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 CNOT3O75175 753 aaKnown RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 BMP10O95393 424 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 B3GALT4O96024 378 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 OR1D4P47884 311 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 RAP1GDS1P52306 607 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 LIM2P55344 173 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 PCBP4P57723 403 aaKnown RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 EMX2Q04743 252 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 ACSM2AQ08AH3 577 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 NCF4Q15080 339 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 NKG7Q16617 165 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 RFTN2Q52LD8 501 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 ACSM2BQ68CK6 577 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 CLNKQ7Z7G1 428 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 CACNA2D3Q8IZS8 1091 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 CA13Q8N1Q1 262 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 C1orf52Q8N6N3 182 aaKnown RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 OR51Q1Q8NH59 317 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 AGR3Q8TD06 166 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 MMABQ96EY8 250 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 ZNF764Q96H86 408 aaPredicted RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 SPSB2Q99619 263 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 SLC7A5P2Q9GIP4 190 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 LRTM1Q9HBL6 345 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 LANCL2Q9NS86 450 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 RIC8BQ9NVN3 520 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 LYARQ9NX58 379 aaKnown RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 NXT1Q9UKK6 140 aaKnown RBP13.48□□□□□ -0.25
SSBP1-201ENST00000265304 USH1CQ9Y6N9 552 aa13.48□□□□□ -0.25
SSBP1-201ENST00000265304 CNTRLQ7Z7A1 2325 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 PKD1L2Q7Z442 2459 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 SAP18O00422 153 aaKnown RBP13.47□□□□□ -0.25
SSBP1-201ENST00000265304 PCDH17O14917 1159 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 RDH16O75452 317 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 RNH1P13489 461 aaKnown RBP13.47□□□□□ -0.25
SSBP1-201ENST00000265304 FBLP22087 321 aaKnown RBP13.47□□□□□ -0.25
SSBP1-201ENST00000265304 CERS1P27544 350 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 TIA1P31483 386 aaKnown RBP eCLIP13.47□□□□□ -0.252e-7■■■■□ 24.6
SSBP1-201ENST00000265304 SSR2P43308 183 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 RAB38P57729 211 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 C21orf58P58505 322 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 CLN3Q13286 438 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 SLC9A5Q14940 896 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 C1orf189Q5VU69 101 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 NOXRED1Q6NXP6 359 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 FAM47EQ6ZV65 393 aa13.47□□□□□ -0.25
SSBP1-201ENST00000265304 ZC3H7AQ8IWR0 971 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms