RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TMEM211Q6ICI0 200 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 CEP128Q6ZU80 1094 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 RAPH1Q70E73 1250 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 ZC3HC1Q86WB0 502 aaKnown RBP11.44□□□□□ -0.58
TRAF4-202ENST00000262396 SULF2Q8IWU5 870 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 SREK1Q8WXA9 508 aaKnown RBP11.44□□□□□ -0.58
TRAF4-202ENST00000262396 DAZLQ92904 295 aaKnown RBP11.44□□□□□ -0.58
TRAF4-202ENST00000262396 NCLNQ969V3 563 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 NAPGQ99747 312 aaPredicted RBP11.44□□□□□ -0.58
TRAF4-202ENST00000262396 RHOJQ9H4E5 214 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 RNF112Q9ULX5 631 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 ZNF835Q9Y2P0 537 aa11.44□□□□□ -0.58
TRAF4-202ENST00000262396 YARS2Q9Y2Z4 477 aaKnown RBP11.44□□□□□ -0.58
TRAF4-202ENST00000262396 A0A1B0GTH9 108 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 E9PLN8 166 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 ZNHIT1O43257 154 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 HS6ST1O60243 411 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 CCNT2O60583 730 aaKnown RBP11.43□□□□□ -0.58
TRAF4-202ENST00000262396 SEC31AO94979 1220 aaKnown RBP11.43□□□□□ -0.58
TRAF4-202ENST00000262396 TUBB4AP04350 444 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 CCDC166P0CW27 439 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 TRHRP34981 398 aaPredicted RBP11.43□□□□□ -0.58
TRAF4-202ENST00000262396 PTGER1P34995 402 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 MTTPP55157 894 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 POU4F1Q01851 419 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 IRF8Q02556 426 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 LAPTM5Q13571 262 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 EFTUD2Q15029 972 aaKnown RBP eCLIP11.43□□□□□ -0.585e-8■■■■■ 33.6
TRAF4-202ENST00000262396 TGFBIQ15582 683 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 PPP1R3AQ16821 1122 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 IL20RBQ6UXL0 311 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 HSDL2Q6YN16 418 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 Q6ZPB1 254 aaPredicted RBP11.43□□□□□ -0.58
TRAF4-202ENST00000262396 CD163Q86VB7 1156 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 DOLPP1Q86YN1 238 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 CTAGE3PQ8IX95 158 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 ZNF595Q8IYB9 648 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 SPATA6LQ8N4H0 392 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 SRFBP1Q8NEF9 429 aaKnown RBP11.43□□□□□ -0.58
TRAF4-202ENST00000262396 CREB3L4Q8TEY5 395 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 RHBDF1Q96CC6 855 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 SERINC2Q96SA4 455 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 VKORC1Q9BQB6 163 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 CENPKQ9BS16 269 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 ROGDIQ9GZN7 287 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 PITHD1Q9GZP4 211 aaPredicted RBP11.43□□□□□ -0.58
TRAF4-202ENST00000262396 POPDC3Q9HBV1 291 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 SAYSD1Q9NPB0 183 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 ADAP2Q9NPF8 381 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 GPRC5BQ9NZH0 403 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 KCMF1Q9P0J7 381 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 COPS7AQ9UBW8 275 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 IKZF3Q9UKT9 509 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 SNX24Q9Y343 169 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 PSAT1Q9Y617 370 aa11.43□□□□□ -0.58
TRAF4-202ENST00000262396 SCN2AQ99250 2005 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 ITPR2Q14571 2701 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 CELSR2Q9HCU4 2923 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 LRIT2A6NDA9 550 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 FANCGO15287 622 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 CLEC3AO75596 197 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 STK16O75716 305 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 WISP2O76076 250 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 PCNAP12004 261 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 COX7A2P14406 83 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 STMN1P16949 149 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 HSPA7P48741 367 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 ATP6V0D1P61421 351 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 RUNX2Q13950 521 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 FRG1Q14331 258 aaKnown RBP11.42□□□□□ -0.58
TRAF4-202ENST00000262396 TERF2Q15554 542 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 PDK4Q16654 411 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 C18orf21Q32NC0 220 aaPredicted RBP11.42□□□□□ -0.58
TRAF4-202ENST00000262396 SULT1C3Q6IMI6 304 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 ARHGAP11AQ6P4F7 1023 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 MEX3BQ6ZN04 569 aaKnown RBP11.42□□□□□ -0.58
TRAF4-202ENST00000262396 SLCO4C1Q6ZQN7 724 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 NCCRP1Q6ZVX7 275 aaPredicted RBP11.42□□□□□ -0.58
TRAF4-202ENST00000262396 MYLK4Q86YV6 388 aaPredicted RBP11.42□□□□□ -0.58
TRAF4-202ENST00000262396 SIAH3Q8IW03 269 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 GPALPP1Q8IXQ4 340 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 OR2L5Q8NG80 312 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 OR5L2Q8NGL0 311 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 FAM57AQ8TBR7 257 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 PHF10Q8WUB8 498 aaKnown RBP11.42□□□□□ -0.58
TRAF4-202ENST00000262396 ANKRD49Q8WVL7 239 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 ASB5Q8WWX0 329 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 UBE2E3Q969T4 207 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 KIAA1191Q96A73 305 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 MS4A6EQ96DS6 147 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 PTCD3Q96EY7 689 aaKnown RBP11.42□□□□□ -0.58
TRAF4-202ENST00000262396 SEC16BQ96JE7 1060 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 LURAP1Q96LR2 239 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 EFCAB11Q9BUY7 163 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 OR8D2Q9GZM6 311 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 DERL2Q9GZP9 239 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 DEFB127Q9H1M4 99 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 DPH5Q9H2P9 285 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 EXO5Q9H790 373 aa11.42□□□□□ -0.58
TRAF4-202ENST00000262396 CAB39LQ9H9S4 337 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms