RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 SSX1Q16384 188 aa18.52■□□□□ 0.56
SCARB1-201ENST00000261693 PRSS53Q2L4Q9 553 aa18.52■□□□□ 0.56
SCARB1-201ENST00000261693 ZDHHC20Q5W0Z9 365 aa18.52■□□□□ 0.56
SCARB1-201ENST00000261693 ARMCX6Q7L4S7 300 aa18.52■□□□□ 0.56
SCARB1-201ENST00000261693 MMP21Q8N119 569 aa18.52■□□□□ 0.56
SCARB1-201ENST00000261693 IL17RDQ8NFM7 739 aa18.52■□□□□ 0.56
SCARB1-201ENST00000261693 ZNF486Q96H40 463 aaPredicted RBP18.52■□□□□ 0.56
SCARB1-201ENST00000261693 MKLN1Q9UL63 735 aa18.52■□□□□ 0.56
SCARB1-201ENST00000261693 CKMT1AP12532 417 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 SOX3P41225 446 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 C2orf80Q0P641 193 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 STARD3Q14849 445 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 MED27Q6P2C8 311 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 HTR3DQ70Z44 454 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 CCDC190Q86UF4 302 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 RASGEF1AQ8N9B8 481 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 VANGL1Q8TAA9 524 aaPredicted RBP18.52■□□□□ 0.55
SCARB1-201ENST00000261693 BHLHE41Q9C0J9 482 aaPredicted RBP18.52■□□□□ 0.55
SCARB1-201ENST00000261693 NEK6Q9HC98 313 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 THSD1Q9NS62 852 aa18.52■□□□□ 0.55
SCARB1-201ENST00000261693 PLXND1Q9Y4D7 1925 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 TRBC2A0A5B9 178 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 A6NL46 340 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 CCRL2O00421 344 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 APOA1P02647 267 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 CATP04040 527 aaKnown RBP18.51■□□□□ 0.55
SCARB1-201ENST00000261693 IGFBP1P08833 259 aaPredicted RBP18.51■□□□□ 0.55
SCARB1-201ENST00000261693 CA8P35219 290 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 DUSP7Q16829 419 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 GDPD4Q6W3E5 623 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 SLCO4C1Q6ZQN7 724 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 RASGRP3Q8IV61 690 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 GEMIN6Q8WXD5 167 aaKnown RBP18.51■□□□□ 0.55
SCARB1-201ENST00000261693 PPCDCQ96CD2 204 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 CPEB1Q9BZB8 566 aaKnown RBP18.51■□□□□ 0.55
SCARB1-201ENST00000261693 NMNAT1Q9HAN9 279 aaPredicted RBP18.51■□□□□ 0.55
SCARB1-201ENST00000261693 GOLGA4Q13439 2230 aaKnown RBP18.51■□□□□ 0.55
SCARB1-201ENST00000261693 PTX3P26022 381 aaPredicted RBP18.51■□□□□ 0.55
SCARB1-201ENST00000261693 TAS2R50P59544 299 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCARB1-201ENST00000261693 SLC30A2Q9BRI3 323 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 CDCA4Q9BXL8 241 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 CLN6Q9NWW5 311 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 CFL2Q9Y281 166 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 KCNE2Q9Y6J6 123 aa18.51■□□□□ 0.55
SCARB1-201ENST00000261693 PNMA8CA0A1B0GUJ8 204 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 LINC00854A0A1B0GVQ3 168 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 EFCAB10A6NFE3 127 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 NPC1O15118 1278 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 SOX14O95416 240 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 URODP06132 367 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 CBLP22681 906 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 SLC15A1P46059 708 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 RPS26P62854 115 aaKnown RBP18.5■□□□□ 0.55
SCARB1-201ENST00000261693 FCHO2Q0JRZ9 810 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 BCL7AQ4VC05 210 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 MPP7Q5T2T1 576 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 PLAG1Q6DJT9 500 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 NLRP8Q86W28 1048 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 TAGAPQ8N103 731 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 MRPS31Q92665 395 aaKnown RBP18.5■□□□□ 0.55
SCARB1-201ENST00000261693 WRAP53Q9BUR4 548 aaKnown RBP18.5■□□□□ 0.55
SCARB1-201ENST00000261693 EMILIN2Q9BXX0 1053 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 CLEC2DQ9UHP7 191 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 ATP6V1HQ9UI12 483 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 SLC25A13Q9UJS0 675 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 AP3D1O14617 1153 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 ENTPD6O75354 484 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 FURINP09958 794 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 TNFSF8P32971 234 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 TGM4P49221 684 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 CRISP1P54107 249 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 EEF1A2Q05639 463 aaKnown RBP18.5■□□□□ 0.55
SCARB1-201ENST00000261693 SLBPQ14493 270 aaKnown RBP eCLIP18.5■□□□□ 0.55
SCARB1-201ENST00000261693 RPS26P11Q5JNZ5 115 aaPredicted RBP18.5■□□□□ 0.55
SCARB1-201ENST00000261693 NXNL2Q5VZ03 156 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 LHX8Q68G74 356 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 TRIM40Q6P9F5 258 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 SLC44A2Q8IWA5 706 aaPredicted RBP18.5■□□□□ 0.55
SCARB1-201ENST00000261693 CPXM2Q8N436 756 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 OXR1Q8N573 874 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 OR56A3Q8NH54 315 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 GOT1L1Q8NHS2 421 aaPredicted RBP18.5■□□□□ 0.55
SCARB1-201ENST00000261693 METTL2AQ96IZ6 378 aaKnown RBP18.5■□□□□ 0.55
SCARB1-201ENST00000261693 LMLNQ96KR4 655 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 FTSJ1Q9UET6 329 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 AP1M2Q9Y6Q5 423 aa18.5■□□□□ 0.55
SCARB1-201ENST00000261693 A0A1W2PRU2 124 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 PDZK1P1A8MUH7 402 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 AGRPO00253 132 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 KLK1P06870 262 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 RPS19P39019 145 aaKnown RBP18.49■□□□□ 0.55
SCARB1-201ENST00000261693 LIMS1P48059 325 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 OR2B6P58173 313 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 TBPL1P62380 186 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 POLR2LP62875 67 aaKnown RBP18.49■□□□□ 0.55
SCARB1-201ENST00000261693 ZMAT1Q5H9K5 638 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 FRMPD2BQ6IN97 320 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 NRARPQ7Z6K4 114 aa18.49■□□□□ 0.55
SCARB1-201ENST00000261693 TMEM25Q86YD3 366 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms