RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 BRAT1Q6PJG6 821 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 KLHL17Q6TDP4 642 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 TMC8Q8IU68 726 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 CD99L2Q8TCZ2 262 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 C16orf78Q8WTQ4 265 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 ZNF480Q8WV37 535 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 TIFAQ96CG3 184 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 CTRCQ99895 268 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 FAM83CQ9BQN1 747 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 CDCA4Q9BXL8 241 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 SIAEQ9HAT2 523 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 FTSJ1Q9UET6 329 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 RAB23Q9ULC3 237 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 CCL26Q9Y258 94 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 MYOFQ9NZM1 2061 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 TRBC2A0A5B9 178 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 EFCAB10A6NFE3 127 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 NEDD8-MDP1E9PL57 170 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 FAM227AF5H4B4 570 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 ASNA1O43681 348 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 GASTP01350 101 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 CHMP24386 653 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 CASP3P42574 277 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 PCYT1AP49585 367 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 HMGA2P52926 109 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 TBPL1P62380 186 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 PDE7AQ13946 482 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 E2F2Q14209 437 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 CCDC92Q53HC0 331 aaPredicted RBP16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 DEPDC1Q5TB30 811 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 PTCHD4Q6ZW05 846 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 SPATC1Q76KD6 591 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 ATCAYQ86WG3 371 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 C9orf43Q8TAL5 461 aaPredicted RBP16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 KCNS3Q9BQ31 491 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 CORO1BQ9BR76 489 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 ZSCAN5AQ9BUG6 496 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 WRAP53Q9BUR4 548 aaKnown RBP16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 SLC46A2Q9BY10 475 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 HMX1Q9NP08 348 aaPredicted RBP16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 EHD3Q9NZN3 535 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 SNX8Q9Y5X2 465 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 ENPP4Q9Y6X5 453 aa16.35■□□□□ 0.21
SLC52A1-201ENST00000254853 ZAR1LA6NP61 321 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 ARHGAP33O14559 1287 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 ZNF197O14709 1029 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 LEFTY1O75610 366 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 RECKO95980 971 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 ALDH1A1P00352 501 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 CXCL10P02778 98 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 TIMP2P16035 220 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 NPPBP16860 134 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 POU1F1P28069 291 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 CNR2P34972 360 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 SOAT1P35610 550 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 SOX6P35712 828 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 TAS2R50P59544 299 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 MEF2AQ02078 507 aaPredicted RBP16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 ZNF630Q2M218 657 aaPredicted RBP16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 ARSIQ5FYB1 569 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 TMEM220Q6QAJ8 160 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 C19orf48Q6RUI8 117 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 SLC7A5P1Q8MH63 180 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 WDR36Q8NI36 951 aaKnown RBP16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 REPS1Q96D71 796 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 SDHCQ99643 169 aaPredicted RBP16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 MAPKAP1Q9BPZ7 522 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 HOXD1Q9GZZ0 328 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 NMNAT1Q9HAN9 279 aaPredicted RBP16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 DMRT3Q9NQL9 472 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 SPG21Q9NZD8 308 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 WASH3PC4AMC7 463 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 CTDSP2O14595 271 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 SSX4O60224 188 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 ARAFP10398 606 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 RCVRNP35243 200 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 ETV6P41212 452 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 PIK3CBP42338 1070 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 RECQLP46063 649 aaPredicted RBP16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 PRLHRP49683 370 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 CRISP1P54107 249 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 PCBP3P57721 371 aaKnown RBP16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 STARD3Q14849 445 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 SSX1Q16384 188 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 ZNF284Q2VY69 593 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 POM121L1PQ3SYA9 428 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 TOR1AIP1Q5JTV8 583 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 SPANXN2Q5MJ10 180 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 FAM71E1Q6IPT2 247 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 CCDC190Q86UF4 302 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 CELF2-AS1Q8N7Q2 184 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 GLYATL1Q969I3 302 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 FOPNLQ96NB1 174 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 VPS35Q96QK1 796 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 NUAK2Q9H093 628 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 CLN6Q9NWW5 311 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 TAS2R9Q9NYW1 312 aa16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 CNOT2Q9NZN8 540 aaKnown RBP16.34■□□□□ 0.21
SLC52A1-201ENST00000254853 MN1Q10571 1320 aaPredicted RBP16.33■□□□□ 0.21
SLC52A1-201ENST00000254853 SH3D21A4FU49 640 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms