RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ASH1LQ9NR48 2969 aaKnown RBP21.54■■□□□ 1.04
LSM4-201ENST00000252816 ASF1BQ9NVP2 202 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 MAP10Q9P2G4 905 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 NTNG1Q9Y2I2 539 aa21.54■■□□□ 1.04
LSM4-201ENST00000252816 COL12A1Q99715 3063 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 TCRBV16S1A1N1A0A5B0 115 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 A8MUI8 341 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 RTCAO00442 366 aaKnown RBP21.53■■□□□ 1.04
LSM4-201ENST00000252816 F10P00742 488 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 UQCRHP07919 91 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 SBK3P0C264 359 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 LIM2P55344 173 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 RAB38P57729 211 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 SLC26A5P58743 744 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 ARG2P78540 354 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 TGM3Q08188 693 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 DDX39BQ13838 428 aaKnown RBP21.53■■□□□ 1.04
LSM4-201ENST00000252816 TLR1Q15399 786 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 LGSNQ5TDP6 509 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 LIPJQ5W064 366 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 FCRLBQ6BAA4 426 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 H3F3CQ6NXT2 135 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 METTL2BQ6P1Q9 378 aaKnown RBP21.53■■□□□ 1.04
LSM4-201ENST00000252816 SCUBE1Q8IWY4 988 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 CYP4X1Q8N118 509 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 EIF1ADQ8N9N8 165 aaKnown RBP21.53■■□□□ 1.04
LSM4-201ENST00000252816 HUS1BQ8NHY5 278 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 HAS2Q92819 552 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 MTBPQ96DY7 904 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 MAGEB10Q96LZ2 347 aaPredicted RBP21.53■■□□□ 1.04
LSM4-201ENST00000252816 KCNC2Q96PR1 638 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 CSF3RQ99062 836 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 MRPL57Q9BQC6 102 aaKnown RBP21.53■■□□□ 1.04
LSM4-201ENST00000252816 OR51B5Q9H339 312 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 COPS7BQ9H9Q2 264 aaPredicted RBP21.53■■□□□ 1.04
LSM4-201ENST00000252816 DAPP1Q9UN19 280 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 RNF11Q9Y3C5 154 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 MMACHCQ9Y4U1 282 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 CLDN16Q9Y5I7 305 aa21.53■■□□□ 1.04
LSM4-201ENST00000252816 CPAMD8Q8IZJ3 1885 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 DYTNA2CJ06 578 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 STX16-NPEPL1H3BU86 382 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 TGFBR3LH3BV60 316 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 SAP18O00422 153 aaKnown RBP21.52■■□□□ 1.04
LSM4-201ENST00000252816 CYR61O00622 381 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 OR7A17O14581 309 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 STX16O14662 325 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 UGDHO60701 494 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 VPS4BO75351 444 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 WDPCPO95876 746 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 GNLYP22749 145 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 ATP5A1P25705 553 aaKnown RBP21.52■■□□□ 1.04
LSM4-201ENST00000252816 SERPINB1P30740 379 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 PIK3CGP48736 1102 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 TMEM35AQ53FP2 167 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 FAM47BQ8NA70 645 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 CMTM7Q96FZ5 175 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 NSUN5Q96P11 429 aaKnown RBP21.52■■□□□ 1.04
LSM4-201ENST00000252816 NPAS2Q99743 824 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 MRPL46Q9H2W6 279 aaKnown RBP21.52■■□□□ 1.04
LSM4-201ENST00000252816 NOL11Q9H8H0 719 aaKnown RBP21.52■■□□□ 1.04
LSM4-201ENST00000252816 KCNK13Q9HB14 408 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 PRM3Q9NNZ6 103 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 DMRT3Q9NQL9 472 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 KCMF1Q9P0J7 381 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 FETUBQ9UGM5 382 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 PCTPQ9UKL6 214 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 TMCO1Q9UM00 188 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 VPS4AQ9UN37 437 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 TSC22D4Q9Y3Q8 395 aa21.52■■□□□ 1.04
LSM4-201ENST00000252816 TCP11X1B4DZS4 312 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 H0YIV9 168 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 SMIM24O75264 130 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 PIK3CBP42338 1070 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 TSFMP43897 325 aaKnown RBP21.51■■□□□ 1.03
LSM4-201ENST00000252816 TNFSF10P50591 281 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 ZNF33BQ06732 778 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 CPSF6Q16630 551 aaKnown RBP eCLIP21.51■■□□□ 1.03
LSM4-201ENST00000252816 DEPDC1Q5TB30 811 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 ABHD17BQ5VST6 288 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 KHDRBS2Q5VWX1 349 aaKnown RBP21.51■■□□□ 1.03
LSM4-201ENST00000252816 CHSY3Q70JA7 882 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 KIF2BQ8N4N8 673 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 L3MBTL4Q8NA19 623 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 SRFBP1Q8NEF9 429 aaKnown RBP21.51■■□□□ 1.03
LSM4-201ENST00000252816 OR52B6Q8NGF0 335 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 CDK15Q96Q40 435 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 MTERF1Q99551 399 aaKnown RBP21.51■■□□□ 1.03
LSM4-201ENST00000252816 BARD1Q99728 777 aaKnown RBP21.51■■□□□ 1.03
LSM4-201ENST00000252816 TBCDQ9BTW9 1192 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 SORBS1Q9BX66 1292 aaKnown RBP21.51■■□□□ 1.03
LSM4-201ENST00000252816 ZBTB26Q9HCK0 441 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 PRTFDC1Q9NRG1 225 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 STMN3Q9NZ72 180 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 ADGRE2Q9UHX3 823 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 PCDHGA11Q9Y5H2 935 aa21.51■■□□□ 1.03
LSM4-201ENST00000252816 COPG1Q9Y678 874 aaKnown RBP21.51■■□□□ 1.03
LSM4-201ENST00000252816 SAGE2PA6NJ88 616 aa21.5■■□□□ 1.03
LSM4-201ENST00000252816 A8MUA0 341 aa21.5■■□□□ 1.03
LSM4-201ENST00000252816 MAN1A2O60476 641 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms