RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ERICH5Q6P6B1 374 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 SLAIN1Q8ND83 568 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PHF10Q8WUB8 498 aaKnown RBP9.69□□□□□ -0.86
COPB1-201ENST00000249923 BTN2A2Q8WVV5 523 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 C17orf50Q8WW18 174 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 ZSWIM3Q96MP5 696 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 LRRC3BQ96PB8 259 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 WFDC6Q9BQY6 131 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 CFHR5Q9BXR6 569 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 BRF2Q9HAW0 419 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 MALT1Q9UDY8 824 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PSORS1C1Q9UIG5 152 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 TBX21Q9UL17 535 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 TPRKBQ9Y3C4 175 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 NINQ8N4C6 2090 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PRAMEF33A0A0G2JMD5 474 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PRAMEF10O60809 474 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 HOXD10P28358 340 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PBLDP30039 288 aaPredicted RBP9.69□□□□□ -0.86
COPB1-201ENST00000249923 TIA1P31483 386 aaKnown RBP eCLIP9.69□□□□□ -0.863e-7■■■■□ 22.1
COPB1-201ENST00000249923 SLC5A12Q1EHB4 618 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 PRR23CQ6ZRP0 262 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 COMMD6Q7Z4G1 85 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 TMPRSS11BQ86T26 416 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 ZNF547Q8IVP9 402 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 DNAJC22Q8N4W6 341 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 TRAM1L1Q8N609 369 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 GGHQ92820 318 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 OTULINQ96BN8 352 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 WDR12Q9GZL7 423 aaKnown RBP9.69□□□□□ -0.86
COPB1-201ENST00000249923 DCSTAMPQ9H295 470 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 C1GALT1Q9NS00 363 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 ADPRHL2Q9NX46 363 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 IMPAD1Q9NX62 359 aa9.69□□□□□ -0.86
COPB1-201ENST00000249923 CFAP20Q9Y6A4 193 aaKnown RBP9.69□□□□□ -0.86
COPB1-201ENST00000249923 TSPAN11A1L157 253 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 PCDH17O14917 1159 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 SUV39H1O43463 412 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 AIREO43918 545 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 C1orf105O95561 183 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 GADD45AP24522 165 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 GGT2P36268 569 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 MMP12P39900 470 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 KCNC3Q14003 757 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 EXOC3L2Q2M3D2 409 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 LY6G5CQ5SRR4 150 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 SLC39A5Q6ZMH5 540 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 FAM9CQ8IZT9 166 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 KIAA1958Q8N8K9 716 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 FAM83FQ8NEG4 500 aaPredicted RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 OR4A15Q8NGL6 344 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 GOT1L1Q8NHS2 421 aaPredicted RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 ZNF296Q8WUU4 475 aaPredicted RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 CLP1Q92989 425 aaKnown RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 OMA1Q96E52 524 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 APOL4Q9BPW4 351 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 OR51B5Q9H339 312 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 CXorf51AA0A1B0GTR3 108 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 HIDE1A8MVS5 230 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 RNASET2O00584 256 aaKnown RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 FFAR1O14842 300 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 PTHP01270 115 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 FURINP09958 794 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 SYN1P17600 705 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 INPP1P49441 399 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 RACK1P63244 317 aaKnown RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 TMEM115Q12893 351 aaPredicted RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 PDE7AQ13946 482 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 TEAD2Q15562 447 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 CNKSR3Q6P9H4 555 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 BRAT1Q6PJG6 821 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 KIAA0907Q7Z7F0 614 aaPredicted RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 C12orf40Q86WS4 652 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 RHOXF1Q8NHV9 184 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 NFKBIDQ8NI38 313 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 ATL1Q8WXF7 558 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 GLYATL1Q969I3 302 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 Q96MT0 163 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 BCL7BQ9BQE9 202 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 ABCG4Q9H172 646 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 DSN1Q9H410 356 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 SH3BP4Q9P0V3 963 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 SLC25A13Q9UJS0 675 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 LOC110117498-PIK3R3F6TDL0 507 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 PLK4O00444 970 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 TGFB1P01137 390 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 ZNF30P17039 623 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 S100A1P23297 94 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 WEE1P30291 646 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 CRATP43155 626 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 CD83Q01151 205 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 FADDQ13158 208 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 ZDHHC20Q5W0Z9 365 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 LIPIQ6XZB0 460 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 PARS2Q7L3T8 475 aaKnown RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 ZNF605Q86T29 641 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 NLRP8Q86W28 1048 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 ARMC8Q8IUR7 673 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 SFTPA1Q8IWL2 248 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 CACTIN-AS1Q8N1I8 211 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms