RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 MICAQ29983 383 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 PRSS53Q2L4Q9 553 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 NLRP8Q86W28 1048 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 LAS2Q8IYD9 372 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF513Q8N8E2 541 aaPredicted RBP13.77□□□□□ -0.21
HIF3A-202ENST00000244303 OR9Q2Q8NGE9 314 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 RHOXF1Q8NHV9 184 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 ING5Q8WYH8 240 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 HPS1Q92902 700 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 WDR34Q96EX3 536 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 EFCAB11Q9BUY7 163 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 DSN1Q9H410 356 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 MARK1Q9P0L2 795 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 SPASTQ9UBP0 616 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 DKK3Q9UBP4 350 aa13.77□□□□□ -0.21
HIF3A-202ENST00000244303 FAM32AQ9Y421 112 aaKnown RBP13.77□□□□□ -0.21
HIF3A-202ENST00000244303 KIAA0100Q14667 2235 aaKnown RBP13.77□□□□□ -0.21
HIF3A-202ENST00000244303 TCF20Q9UGU0 1960 aaKnown RBP13.77□□□□□ -0.21
HIF3A-202ENST00000244303 CLCA1A8K7I4 914 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 K7ESM1 405 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 KPNA3O00505 521 aaPredicted RBP13.76□□□□□ -0.21
HIF3A-202ENST00000244303 AIREO43918 545 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 SOD1P00441 154 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 CDK1P06493 297 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 CHI3L1P36222 383 aaPredicted RBP13.76□□□□□ -0.21
HIF3A-202ENST00000244303 RBBP4Q09028 425 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 DNASE1L3Q13609 305 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 TIGD6Q17RP2 521 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 TMEM240Q5SV17 173 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 MLIPQ5VWP3 458 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 FAM71E1Q6IPT2 247 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 TRAPPC5Q8IUR0 188 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 FBXO15Q8NCQ5 510 aaPredicted RBP13.76□□□□□ -0.21
HIF3A-202ENST00000244303 MCFD2Q8NI22 146 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 UTP15Q8TED0 518 aaKnown RBP13.76□□□□□ -0.21
HIF3A-202ENST00000244303 MYDGFQ969H8 173 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 SGPP1Q9BX95 441 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 OR2AG1Q9H205 316 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 EHD1Q9H4M9 534 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 TMEM38AQ9H6F2 299 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 THSD1Q9NS62 852 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 FKBP14Q9NWM8 211 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 GPR83Q9NYM4 423 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF226Q9NYT6 803 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 M0R129 80 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 LILRB5O75023 590 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 KLK1P06870 262 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 ALOX5P09917 674 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 POU2F1P14859 743 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 TGM1P22735 817 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 GADD45AP24522 165 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 SOAT1P35610 550 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 CDK6Q00534 326 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 TAP2Q03519 686 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 EEF1A2Q05639 463 aaKnown RBP13.76□□□□□ -0.21
HIF3A-202ENST00000244303 C1QTNF12Q5T7M4 302 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 HIST2H2AA3Q6FI13 130 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 TRIM40Q6P9F5 258 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 CCDC80Q76M96 950 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 SPRED2Q7Z698 418 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 NRSN1Q8IZ57 195 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 OXR1Q8N573 874 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF740Q8NDX6 193 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 OR9A1PQ8NGU1 263 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 SLC5A11Q8WWX8 675 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 OTUB2Q96DC9 234 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 DTD2Q96FN9 168 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 MYNNQ9NPC7 610 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 TAS2R9Q9NYW1 312 aa13.76□□□□□ -0.21
HIF3A-202ENST00000244303 PRAMEF33A0A0G2JMD5 474 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 PCDH17O14917 1159 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 AQP9O43315 295 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 PRAMEF10O60809 474 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 SRPRAP08240 638 aaKnown RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 STSP08842 583 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 HNRNPA1P09651 372 aaKnown RBP eCLIP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 CEBPBP17676 345 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 GABRB1P18505 474 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 PTX3P26022 381 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 FOXD4Q12950 439 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 CAMK1Q14012 370 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 GANABQ14697 944 aaKnown RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 FAM180BQ6P0A1 224 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 TRMT11Q7Z4G4 463 aaKnown RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 ZNF605Q86T29 641 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 LRRC56Q8IYG6 542 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 MMP21Q8N119 569 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 LRIG1Q96JA1 1093 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 COQ10AQ96MF6 247 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 KLHL25Q9H0H3 589 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 EPHX3Q9H6B9 360 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 SACM1LQ9NTJ5 587 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 A0A1W2PRB8 838 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 SPINT1O43278 529 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 IL3P08700 152 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 ITGA2P17301 1181 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 RPL3P39023 403 aaKnown RBP13.75□□□□□ -0.21
HIF3A-202ENST00000244303 CTSKP43235 329 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 XCR1P46094 333 aa13.75□□□□□ -0.21
HIF3A-202ENST00000244303 ELOAQ14241 798 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms