RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 LRRC14BA6NHZ5 514 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 SYCE1LA8MT33 242 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 RTCAO00442 366 aaKnown RBP13.32□□□□□ -0.28
GPN3-201ENST00000228827 ALDOAP04075 364 aaKnown RBP13.32□□□□□ -0.28
GPN3-201ENST00000228827 MYBL2P10244 700 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 MTHFD2P13995 350 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 GFAPP14136 432 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 TYK2P29597 1187 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 HPDP32754 393 aaPredicted RBP13.32□□□□□ -0.28
GPN3-201ENST00000228827 CD96P40200 585 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 SERPINB8P50452 374 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 LIM2P55344 173 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 KCNK10P57789 538 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 OC90Q02509 493 aaPredicted RBP13.32□□□□□ -0.28
GPN3-201ENST00000228827 SLC13A2Q13183 592 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 OR1C1Q15619 314 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 INAQ16352 499 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 PFKFB4Q16877 469 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 MYLK4Q86YV6 388 aaPredicted RBP13.32□□□□□ -0.28
GPN3-201ENST00000228827 C5orf34Q96MH7 638 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 SERINC2Q96SA4 455 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 CSF3RQ99062 836 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 NPLQ9BXD5 320 aaPredicted RBP13.32□□□□□ -0.28
GPN3-201ENST00000228827 ACSS3Q9H6R3 686 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 PRTFDC1Q9NRG1 225 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 PLEKHB1Q9UF11 243 aaPredicted RBP13.32□□□□□ -0.28
GPN3-201ENST00000228827 MMACHCQ9Y4U1 282 aa13.32□□□□□ -0.28
GPN3-201ENST00000228827 PRRC2CQ9Y520 2896 aaKnown RBP13.31□□□□□ -0.28
GPN3-201ENST00000228827 SCN3AQ9NY46 2000 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 TGFBR3LH3BV60 316 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 SAP18O00422 153 aaKnown RBP13.31□□□□□ -0.28
GPN3-201ENST00000228827 MYO1DO94832 1006 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 KLHL2O95198 593 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 DDAH2O95865 285 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 LDLRP01130 860 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 TGFB1P01137 390 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 EPB42P16452 691 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 PPP2R1BP30154 601 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 TDGF1P3P51864 188 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 MTTPP55157 894 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 TGM3Q08188 693 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 DDX39BQ13838 428 aaKnown RBP13.31□□□□□ -0.28
GPN3-201ENST00000228827 TBCCQ15814 346 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 ZNF324BQ6AW86 544 aaPredicted RBP13.31□□□□□ -0.28
GPN3-201ENST00000228827 SPINK14Q6IE38 97 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 MED27Q6P2C8 311 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 CEP128Q6ZU80 1094 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 RPS19BP1Q86WX3 136 aaKnown RBP13.31□□□□□ -0.28
GPN3-201ENST00000228827 SCUBE1Q8IWY4 988 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 RNF175Q8N4F7 328 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 NFAM1Q8NET5 270 aaPredicted RBP13.31□□□□□ -0.28
GPN3-201ENST00000228827 RHEBL1Q8TAI7 183 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 ZNF473Q8WTR7 871 aaKnown RBP13.31□□□□□ -0.28
GPN3-201ENST00000228827 NR4A3Q92570 626 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 FMO2Q99518 471 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 MS4A8Q9BY19 250 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 PRDM7Q9NQW5 492 aa13.31□□□□□ -0.28
GPN3-201ENST00000228827 CPSF2Q9P2I0 782 aaKnown RBP13.31□□□□□ -0.28
GPN3-201ENST00000228827 CLDN4O14493 209 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 LRRTM2O43300 516 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 INHBAP08476 426 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 MST1P26927 711 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 TPP2P29144 1249 aaPredicted RBP13.3□□□□□ -0.28
GPN3-201ENST00000228827 ECHS1P30084 290 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 CASP2P42575 452 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 SETDB1Q15047 1291 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 ACAP2Q15057 778 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 ZNF468Q5VIY5 522 aaPredicted RBP13.3□□□□□ -0.28
GPN3-201ENST00000228827 KLC3Q6P597 504 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 ZNF793Q6ZN11 406 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 CCDC91Q7Z6B0 441 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 UBE3DQ7Z6J8 389 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 RELL1Q8IUW5 271 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 LAS2Q8IYD9 372 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 PLD6Q8N2A8 252 aaKnown RBP13.3□□□□□ -0.28
GPN3-201ENST00000228827 MDS2Q8NDY4 140 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 OR7G3Q8NG95 312 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 THAP3Q8WTV1 239 aaPredicted RBP13.3□□□□□ -0.28
GPN3-201ENST00000228827 SLC44A1Q8WWI5 657 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 UBE2E3Q969T4 207 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 PAFAH2Q99487 392 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 DEFB126Q9BYW3 111 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 OR51B5Q9H339 312 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 ZNF358Q9NW07 568 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 DAPP1Q9UN19 280 aa13.3□□□□□ -0.28
GPN3-201ENST00000228827 MRPS33Q9Y291 106 aaKnown RBP13.3□□□□□ -0.28
GPN3-201ENST00000228827 TRBV11-1A0A0K0K1C0 115 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 POC1B-GALNT4F8VUJ3 575 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 CYR61O00622 381 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 CRYABP02511 175 aaKnown RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 CD46P15529 392 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 HSD17B7P56937 341 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 NAA30Q147X3 362 aaPredicted RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 C4orf17Q53FE4 359 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 GLE1Q53GS7 698 aaKnown RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 GFRALQ6UXV0 394 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 ADAMTS18Q8TE60 1221 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 SREK1Q8WXA9 508 aaKnown RBP13.29□□□□□ -0.28
GPN3-201ENST00000228827 NCLNQ969V3 563 aa13.29□□□□□ -0.28
GPN3-201ENST00000228827 GPR78Q96P69 363 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms