RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 STOML2Q9UJZ1 356 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 SH2B3Q9UQQ2 575 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 TRAPPC4Q9Y296 219 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 HCN4Q9Y3Q4 1203 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 A0A0C4DFX4 3053 aa11.87□□□□□ -0.51
NUP88-201ENST00000225696 A0A075B6Q4 140 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 EFCAB10A6NFE3 127 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 MANSC4A6NHS7 340 aaPredicted RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 PLD2O14939 933 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CSO75390 466 aaKnown RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 KLHL18O94889 574 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CYP17A1P05093 508 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 RPLP2P05387 115 aaKnown RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 CYP2A7P20853 494 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 SSTR4P31391 388 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 LIM2P55344 173 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CDC42P60953 191 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 NKX3-2P78367 333 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 HOXC5Q00444 222 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 HYAL2Q12891 473 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 LMAN2Q12907 356 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 KRR1Q13601 381 aaKnown RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 PUM1Q14671 1186 aaKnown RBP eCLIP11.86□□□□□ -0.51
NUP88-201ENST00000225696 GPNMBQ14956 572 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 SEC23BQ15437 767 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 TEAD4Q15561 434 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 ARMC4Q5T2S8 1044 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 ZNF770Q6IQ21 691 aaPredicted RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 TTC23LQ6PF05 361 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 TPRG1Q6ZUI0 275 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 VN1R5Q7Z5H4 357 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 ABI3BPQ7Z7G0 1075 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 SLC44A2Q8IWA5 706 aaPredicted RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 CELF5Q8N6W0 485 aaKnown RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 CHTF18Q8WVB6 975 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 RNF170Q96K19 258 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 VPS35Q96QK1 796 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 PIP5K1AQ99755 562 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 WFDC6Q9BQY6 131 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 C2orf49Q9BVC5 232 aaPredicted RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 ZNF556Q9HAH1 456 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 ASAH2Q9NR71 780 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 NPAP1Q9NZP6 1156 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 NUFIP1Q9UHK0 495 aaKnown RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 RAB23Q9ULC3 237 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 DNAH14Q0VDD8 3507 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 PCM1Q15154 2024 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 MYOFQ9NZM1 2061 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 C5orf42Q9H799 3197 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CENPXA8MT69 81 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 GADD45GO95257 159 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 SLC16A8O95907 504 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CSF2P04141 144 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 SCG5P05408 212 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 ELNP15502 786 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CD72P21854 359 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 BDKRB1P46663 353 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CSNK1DP48730 415 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CRISP1P54107 249 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 DAB2P98082 770 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CRHR2Q13324 411 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 CLPPQ16740 277 aaPredicted RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 FLYWCH1Q4VC44 716 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 GCNT6Q5T4J0 391 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 SLC8B1Q6J4K2 584 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 RETSATQ6NUM9 610 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 ARMCX6Q7L4S7 300 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 LSRQ86X29 649 aaPredicted RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 SLC34A3Q8N130 599 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 HJURPQ8NCD3 748 aaPredicted RBP11.86□□□□□ -0.51
NUP88-201ENST00000225696 DBF4BQ8NFT6 615 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 SRRQ9GZT4 340 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 BRD9Q9H8M2 597 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 SLC25A19Q9HC21 320 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 THSD1Q9NS62 852 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 SNX11Q9Y5W9 270 aa11.86□□□□□ -0.51
NUP88-201ENST00000225696 H0YIV9 168 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 H7C4K7 107 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 RNASET2O00584 256 aaKnown RBP11.85□□□□□ -0.51
NUP88-201ENST00000225696 NRG2O14511 850 aaPredicted RBP11.85□□□□□ -0.51
NUP88-201ENST00000225696 SOCS5O75159 536 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 UGT2B17O75795 530 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 PRKCAP17252 672 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 SERPINA4P29622 427 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 TIE1P35590 1138 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 DDOSTP39656 456 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 TUFMP49411 452 aaKnown RBP11.85□□□□□ -0.51
NUP88-201ENST00000225696 PRIM2P49643 509 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 RPS26P62854 115 aaKnown RBP11.85□□□□□ -0.51
NUP88-201ENST00000225696 PSPHP78330 225 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 CDK6Q00534 326 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 RPS26P11Q5JNZ5 115 aaPredicted RBP11.85□□□□□ -0.51
NUP88-201ENST00000225696 LIPKQ5VXJ0 399 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 AGTRAPQ6RW13 159 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 LYPD8Q6UX82 237 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 TMIGD1Q6UXZ0 262 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 TMPRSS11AQ6ZMR5 421 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 CAMKMTQ7Z624 323 aa11.85□□□□□ -0.51
NUP88-201ENST00000225696 GLCCI1Q86VQ1 547 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms