RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 CLIP4Q8N3C7 705 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 NPWQ8N729 165 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 YIPF7Q8N8F6 280 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 DNAJA4Q8WW22 397 aaPredicted RBP22.29■■□□□ 1.16
TARBP1-201ENST00000040877 GRHPRQ9UBQ7 328 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 LILRB3O75022 631 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 BCKDHAP12694 445 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 SLC6A9P48067 706 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 NXPE4Q6UWF7 544 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.29■■□□□ 1.16
TARBP1-201ENST00000040877 GALNTL5Q7Z4T8 443 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 CBARPQ8N350 705 aaPredicted RBP22.29■■□□□ 1.16
TARBP1-201ENST00000040877 FAM86B1Q8N7N1 296 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 SUN5Q8TC36 379 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 MARCH4Q9P2E8 410 aaPredicted RBP22.29■■□□□ 1.16
TARBP1-201ENST00000040877 IGLON5A6NGN9 336 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 COLEC12Q5KU26 742 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 OR52E8Q6IFG1 317 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 RANBP10Q6VN20 620 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 OR6N1Q8NGY5 312 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 PEPDP12955 493 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 COQ5Q5HYK3 327 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 RPL13AP3Q6NVV1 102 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 MSANTD1Q6ZTZ1 278 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 CCDC54Q8NEL0 328 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 DAZLQ92904 295 aaKnown RBP22.29■■□□□ 1.16
TARBP1-201ENST00000040877 CMKLR1Q99788 373 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 GPR174Q9BXC1 333 aa22.29■■□□□ 1.16
TARBP1-201ENST00000040877 IL3P08700 152 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 VMACQ2NL98 169 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 FLYWCH1Q4VC44 716 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 HACD2Q6Y1H2 254 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 ANKFN1Q8N957 763 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 SLC45A3Q96JT2 553 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 HERPUD2Q9BSE4 406 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 CCDC59Q9P031 241 aaKnown RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 GIMAP2Q9UG22 337 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 MEMO1Q9Y316 297 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 GMEB1Q9Y692 573 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 A0A1W2PRG6 482 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 OR6C74A6NCV1 312 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 RPS3P23396 243 aaKnown RBP eCLIP22.28■■□□□ 1.162e-6■■□□□ 14.1
TARBP1-201ENST00000040877 CST5P28325 142 aaPredicted RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 GALNT1Q10472 559 aaPredicted RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 GOLM1Q8NBJ4 401 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 TMLHEQ9NVH6 421 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 APOBEC3BQ9UH17 382 aaKnown RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 TLX2O43763 284 aaPredicted RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 NOS1APO75052 506 aaPredicted RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 CHRM5P08912 532 aaPredicted RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 BPIP17213 487 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 DOC2AQ14183 400 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 ARL9Q6T311 187 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 ERI1Q8IV48 349 aaKnown RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 CEP97Q8IW35 865 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 PTCHD1Q96NR3 888 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 SEC61A2Q9H9S3 476 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 EXOSC1Q9Y3B2 195 aaKnown RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 MEIS3P2A8K0S8 358 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 JUNDP17535 347 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 CDKL4Q5MAI5 379 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 CATSPEREQ5SY80 951 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 ZNF852Q6ZMS4 543 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 C1orf216Q8TAB5 229 aa22.28■■□□□ 1.16
TARBP1-201ENST00000040877 ZNF717Q9BY31 904 aaPredicted RBP22.28■■□□□ 1.16
TARBP1-201ENST00000040877 NAV1Q8NEY1 1877 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 EEDO75530 441 aaKnown RBP22.27■■□□□ 1.16
TARBP1-201ENST00000040877 ZNF821O75541 412 aaPredicted RBP22.27■■□□□ 1.16
TARBP1-201ENST00000040877 F8A1P23610 371 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 CD70P32970 193 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 TM4SF4P48230 202 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 NKD1Q969G9 470 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 TMEM80Q96HE8 168 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 SCGB3A2Q96PL1 93 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 DPH7Q9BTV6 452 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 CCDC106Q9BWC9 280 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 DKKL1Q9UK85 242 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 PIAS3Q9Y6X2 628 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 IRS2Q9Y4H2 1338 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 HYKKA2RU49 373 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 ITIH1P19827 911 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 OR12D2P58182 307 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 SHQ1Q6PI26 577 aaKnown RBP22.27■■□□□ 1.16
TARBP1-201ENST00000040877 HSDL2Q6YN16 418 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 LRRTM3Q86VH5 581 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 SLC39A11Q8N1S5 342 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 CCDC107Q8WV48 283 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 TAMM41Q96BW9 452 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 MUSKO15146 869 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 ADRB3P13945 408 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 GADD45AP24522 165 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 CDKN2DP55273 166 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 ALG1LQ6GMV1 187 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 CCDC116Q8IYX3 515 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 OR2L3Q8NG85 312 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 GDE1Q9NZC3 331 aa22.27■■□□□ 1.16
TARBP1-201ENST00000040877 FAAHO00519 579 aa22.27■■□□□ 1.15
TARBP1-201ENST00000040877 KHNYNO15037 678 aaKnown RBP22.27■■□□□ 1.15
TARBP1-201ENST00000040877 C7P10643 843 aa22.27■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms