RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 TMEM220Q6QAJ8 160 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 MAVSQ7Z434 540 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 TOMM5Q8N4H5 51 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 OR2AP1Q8NGE2 309 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 SLC38A2Q96QD8 506 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 WRAP53Q9BUR4 548 aaKnown RBP11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 GPR62Q9BZJ7 368 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 HCN4Q9Y3Q4 1203 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 CMAHPQ9Y471 501 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 ALG5Q9Y673 324 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 A0A0X1KG70 313 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 A0A1B0GTW7 788 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 KIAA0513O60268 411 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 BMP4P12644 408 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 PKLRP30613 574 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 DNAJA1P31689 397 aaKnown RBP11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 CSTF2P33240 577 aaKnown RBP eCLIP11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 DGKEP52429 567 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 PPIGQ13427 754 aaKnown RBP eCLIP11.69□□□□□ -0.542e-6■■■□□ 17.5
TSPAN9-201ENST00000011898 IFI44LQ53G44 452 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 METTL4Q8N3J2 472 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 FTMTQ8N4E7 242 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 CELF2-AS1Q8N7Q2 184 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 CEP76Q8TAP6 659 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 L3HYPDHQ96EM0 354 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 PYURFQ96I23 114 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 COL21A1Q96P44 957 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 ARL6Q9H0F7 186 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 SDR39U1Q9NRG7 319 aaPredicted RBP11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 GULP1Q9UBP9 304 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 SEC14L4Q9UDX3 406 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 YIPF1Q9Y548 306 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 POLR1CO15160 346 aaPredicted RBP11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 SLC35G4P0C7Q5 338 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 POLR2CP19387 275 aaPredicted RBP11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 GKP32189 559 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 SSR2P43308 183 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 FOXA1P55317 472 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 BTN3A2P78410 334 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 CD300CQ08708 224 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 CD47Q08722 323 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 HNRNPA0Q13151 305 aaKnown RBP11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 GNA13Q14344 377 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 OXA1LQ15070 435 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 ELP2Q6IA86 826 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 ZNF438Q7Z4V0 828 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 NRARPQ7Z6K4 114 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 RGL4Q8IZJ4 473 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 OR6Q1Q8NGQ2 317 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 USP7Q93009 1102 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 MCMBPQ9BTE3 642 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 ZNF416Q9BWM5 594 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 TMEM181Q9P2C4 612 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 HMX3A6NHT5 357 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 OPN1SWP03999 348 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 DCKP27707 260 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 TRIM23P36406 574 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 P2RX3P56373 397 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 IQCCQ4KMZ1 466 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 KHDRBS2Q5VWX1 349 aaKnown RBP11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 TMEM17Q86X19 198 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 Q8N402 240 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 C9orf43Q8TAL5 461 aaPredicted RBP11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 CD244Q9BZW8 370 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 RNF121Q9H920 327 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 SMURF1Q9HCE7 757 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 ACTR10Q9NZ32 417 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 MGAT4BQ9UQ53 548 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 MYO10Q9HD67 2058 aa11.69□□□□□ -0.54
TSPAN9-201ENST00000011898 FAUP35544 74 aaKnown RBP11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 LCN8Q6JVE9 175 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 KDELC1Q6UW63 502 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 CHST9Q7L1S5 443 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 BEND5Q7L4P6 421 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 TMEM151AQ8N4L1 468 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 FUBP1Q96AE4 644 aaKnown RBP11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 OLAHQ9NV23 265 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 ENPP5Q9UJA9 477 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 RPH3AQ9Y2J0 694 aaPredicted RBP11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 CROCCQ5TZA2 2017 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 AKAP8O43823 692 aaKnown RBP11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 RASGRP1O95267 797 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 FGF4P08620 206 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 CPN2P22792 545 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 CA5AP35218 305 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 AP1S2P56377 157 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 SSX2Q16385 188 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 KCTD11Q693B1 232 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 FAM171BQ6P995 826 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 VWA5B2Q8N398 1253 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 OR2T35Q8NGX2 323 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 MYRFLQ96LU7 910 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 C12orf66Q96MD2 445 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 TM9SF2Q99805 663 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 SSX3Q99909 188 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 RBCK1Q9BYM8 510 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 TREX1Q9NSU2 369 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 FZD4Q9ULV1 537 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 KANTRA0A1W2PQU2 76 aa11.68□□□□□ -0.54
TSPAN9-201ENST00000011898 AGAP5A6NIR3 686 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms